Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04827 ATGGAGTTTTACTGGGACCTATCTGTGACTCCTGTCCCGGAACCAATCCAATTCATCGCGCAAGACTTTCCTTCTGTGAATGAATACTTCTCCATTCATCTGAGTTACACCAACTCAACTTTTTCTTCCATGTCCAATGCCACAAACCCTTCTATAACTTTTGTCAATGACTACTTCTTGATCCCTATCGATATCTTATGCAATTGTGATGCAGACACAGTCATGGATGATGATGATCACACCACTCTCTTCTTGCACAACACTTTCCGCTTCGTGCCTACTTACGTGTTAGACACCGCTCTATATCATATGGGCCATTGTGCGAGAAACATGGTTGCACTCAACACGGAAGAAGGTGGAATTTTGGAGATGAATGTGTTGCTTAATGTTACCACATACATGGTAGAAGAAGATCAATTTGATCAATATCCTAACAGTAATGGTCAACAAATTGTGTATAATTTAGAGAAATTGGAAGTTGATCTTCCAATATTAGATTCTATAGATAAATGTTCGATTTGTTTGGAGGAGTTTTGCAAAGGATCACAATTAGAACTCTATTATACAAAATGTTCGCATGTTTTCCATAAAGATTGTATTGACAAGTGGATCCATCGATGCATCAGTAGTTCATCTTCATGTTCTTGTCCATTGTGTCGATGCGAGATAATATAA 675 0.3822 MEFYWDLSVTPVPEPIQFIAQDFPSVNEYFSIHLSYTNSTFSSMSNATNPSITFVNDYFLIPIDILCNCDADTVMDDDDHTTLFLHNTFRFVPTYVLDTALYHMGHCARNMVALNTEEGGILEMNVLLNVTTYMVEEDQFDQYPNSNGQQIVYNLEKLEVDLPILDSIDKCSICLEEFCKGSQLELYYTKCSHVFHKDCIDKWIHRCISSSSSCSCPLCRCEII 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04827 224 SUPERFAMILY RING/U-box 170 223 - -
Mepo2g04827 224 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 126 221 - -
Mepo2g04827 224 SMART ring_2 171 219 IPR001841 -
Mepo2g04827 224 ProSiteProfiles Zinc finger RING-type profile. 171 220 IPR001841 -
Mepo2g04827 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 224 IPR013083 -
Mepo2g04827 224 Pfam Ring finger domain 169 220 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04827 Mepo-Chr2 56575563 56576237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04827 171 221 C3H Transcription Factor Family AT5G41430 47.059 4.72e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04827 - - tpra:123915150 165.622