LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g04815	ATGGGGAGAAGGATACTGAACGATGCGTTGAGGAGTATGGTGAATGCTGAGAAGAGAGGGAAAGCTATGGTGGAGCTTAAACCTATATCCAATGTTATCTCTTCTTTTCTCCATATCATGAAACACCGCGGATATATCAAGGACTTTCAGATCTATGATCCCCATAGAGTGGGGAGGATCACAGTTGAGCTACAAGGTAGAATTAATGATTGCAAGGCCCTTACATACCGACAAGACCTCAAGGCAAAGGATATTGAAGCCTACAGATTGAACACTCTTCCAACACATCAGTGGGGTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCCGCAAAAAGGAATGTAGGTGGTCAGGTTCTTGGTTACTTTCACTAA	390	0.4308	MGRRILNDALRSMVNAEKRGKAMVELKPISNVISSFLHIMKHRGYIKDFQIYDPHRVGRITVELQGRINDCKALTYRQDLKAKDIEAYRLNTLPTHQWGYVVITTPDGVLDHEEAAKRNVGGQVLGYFH	129

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo2g04815	129	Gene3D	-	2	68	-	-
	Mepo2g04815	129	FunFam	40S ribosomal protein S15a	1	68	-	-
	Mepo2g04815	129	Pfam	Ribosomal protein S8	6	127	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Mepo2g04815	129	Gene3D	-	69	129	-	-
	Mepo2g04815	129	SUPERFAMILY	Ribosomal protein S8	3	129	IPR035987	GO:0003735\|GO:0005840\|GO:0006412
	Mepo2g04815	129	PANTHER	40S RIBOSOMAL PROTEIN S15A	1	128	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Mepo2g04815	129	ProSitePatterns	Ribosomal protein S8 signature.	99	116	IPR000630	GO:0003735\|GO:0005840\|GO:0006412
	Mepo2g04815	129	FunFam	40S ribosomal protein S15a-5	69	129	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g04815	Mepo-Chr2	56458881	56460606	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g04815	1	129	Cytoplasmic Ribosomal Protein Gene Family	AT4G29430	80.620	2.46e-79	228

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g04815	K02957		-	gmx:100306361	238.81

Showing 1 to 1 of 1 entries