Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g04815 | ATGGGGAGAAGGATACTGAACGATGCGTTGAGGAGTATGGTGAATGCTGAGAAGAGAGGGAAAGCTATGGTGGAGCTTAAACCTATATCCAATGTTATCTCTTCTTTTCTCCATATCATGAAACACCGCGGATATATCAAGGACTTTCAGATCTATGATCCCCATAGAGTGGGGAGGATCACAGTTGAGCTACAAGGTAGAATTAATGATTGCAAGGCCCTTACATACCGACAAGACCTCAAGGCAAAGGATATTGAAGCCTACAGATTGAACACTCTTCCAACACATCAGTGGGGTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCCGCAAAAAGGAATGTAGGTGGTCAGGTTCTTGGTTACTTTCACTAA | 390 | 0.4308 | MGRRILNDALRSMVNAEKRGKAMVELKPISNVISSFLHIMKHRGYIKDFQIYDPHRVGRITVELQGRINDCKALTYRQDLKAKDIEAYRLNTLPTHQWGYVVITTPDGVLDHEEAAKRNVGGQVLGYFH | 129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g04815 | 129 | Gene3D | - | 2 | 68 | - | - | |
Mepo2g04815 | 129 | FunFam | 40S ribosomal protein S15a | 1 | 68 | - | - | |
Mepo2g04815 | 129 | Pfam | Ribosomal protein S8 | 6 | 127 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04815 | 129 | Gene3D | - | 69 | 129 | - | - | |
Mepo2g04815 | 129 | SUPERFAMILY | Ribosomal protein S8 | 3 | 129 | IPR035987 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04815 | 129 | PANTHER | 40S RIBOSOMAL PROTEIN S15A | 1 | 128 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04815 | 129 | ProSitePatterns | Ribosomal protein S8 signature. | 99 | 116 | IPR000630 | GO:0003735|GO:0005840|GO:0006412 | |
Mepo2g04815 | 129 | FunFam | 40S ribosomal protein S15a-5 | 69 | 129 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g04815 | Mepo-Chr2 | 56458881 | 56460606 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g04815 | 1 | 129 | Cytoplasmic Ribosomal Protein Gene Family | AT4G29430 | 80.620 | 2.46e-79 | 228 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g04815 | K02957 | - | gmx:100306361 | 238.81 |