Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04806 ATGAATAAACAAAAGGGTCATCATTATGAAGAAGAAATGAGTTCTTCCTCTAAGATTGTTATAGTTGCAGTGAAAGCTTCAAAAGATATTTCAAGAACTGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTTTTGGTTATCATTCCAGAACTTTCTTCAAGGAAGAAGGTATGGGGTATTTCAAGATTTACTACTGATTGTGCAACGAGTCACTGGACATCGCGATTAGGAACTGTTTCAGATCAGAAAGAAGTTATTACAAATTCATGTTCTCAATTAGTGCTTCAACTCCATGATTTTTATGATCCTGAGAAGATAAAGATTAGAGTGAAGATTCTTTCTGGTTCTTTGTGCGGTGCAGTGGCTGCTGAAGCCAAGAGAGTACAGTCAAGTTGGGTTATATTGGACAGAAAATTGAAAGGTGAAAAGAAATACTGCATGGATGAGCTGCATTGCAATATTGTAATTATGAAGCATTCTCATCCGAAGATTCTACGATTGAATTTGAATAGTTCACCTAAGAAGGAAGGAAGAGATTGTGCATTGTTGTTGGAACCAAATGCATACACAAGTAACTTAAAAGACAATTTTGAACATTCGGATATAGTTAGAGGTCCAGCAGTCACTCCTGCTAGTAGTCCAGAGCAAGGGTCACCACCATTGACTGTAACTGATATTGGAACAGCTTCAATGTCGAGCTCAGATCCTGGAACATCGCCATTTTTCCACTCTGACAACTATGATAGGCGAAGGAGATGTTTTCCCTTTGTTGTTCATGAGGGACTGTTGAACCTTGAGGATATTGAATCTGACTCGGAGAGTGAAAAGCTAAGTTCATCATCGAAAAGTTCGTCTTTTCAGCCATGGATTTCAAATGTAATTTGTGTAGATGGTGAGTTCTCAAAACACGAGGACAATATGCAAAGATCTAGTGATAAGTCTTTGGTTTATGAAGCTTTGCTTCAGAAATTGACATTCTTGGATCAAGATCCTATCTTTGGAGTGTCTACTGGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCCAGAAATGCACCTCATGGACCTCCTCCATTGTGCTCTATTTGTCAGCACAAAGGACCTGCATTTGGGAATCCTCCAAGGTGGTTTACATTTGCAGAACTACAACTCGCCACGGGCGGGTTTTCTCAAGCAAACTTCTTAGCTGAAGGTGGCTTTGGTTCGGTACACCGTGGTGTTCTACAGGATGGGCAAGTCGTTGCTGTCAAGCAATATAAATTAGCCAGTACTCAAGGAGACAAAGAATTTTGCTCGGAAGTAGAGGTCTTAAGCTGCGCACAACACCGCAATGTTGTGATGCTAATTGGGTTCTGTGTTGAAGATGGAAGAAGATTGCTAGTTTACGAGTATATCTGCAACGGTTCGCTTGATTCTCATCTCTATGGACGGATGCAGAATGTGCTGGATTGGTCTGCACGCCAAAAAATTGCGGTTGGAGCAGCTCGTGGTTTGAGATATCTTCATGAAGAATGTAGAGTTGGTTGCATTGTACACCGTGATTTGCGGCCTAACAATATCCTCCTCACTCATGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCACCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCGTTTGGGATTGTATTACTAGAGCTTGTGACAGGTCGGAAAGCCGTGGATATTGGCCGGCCGAGGGGCCAACAATGCCTTAGTGAATGGGCACGGCCATTGCTTGAAGAAAATGCCATTGATAAACTAGTAGATCCGAGCATAGGAAATTTCTATGTTGATCAAGAGGTTTATCGCATGATGCAATGTTCTTCTATGTGTATTCGACGGGATCCTCATTTAAGGCCTCGAGTGTCTCAGGTTGGAAACTTAATTAATTTACATGTCTATAATTTATTTATTTATTACTCATCAAGTTCAAGCATATTTGTCGATTGGACCAATTGA 2088 0.409 MNKQKGHHYEEEMSSSSKIVIVAVKASKDISRTALVWALTHVVQPGDCIKLLVIIPELSSRKKVWGISRFTTDCATSHWTSRLGTVSDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDRKLKGEKKYCMDELHCNIVIMKHSHPKILRLNLNSSPKKEGRDCALLLEPNAYTSNLKDNFEHSDIVRGPAVTPASSPEQGSPPLTVTDIGTASMSSSDPGTSPFFHSDNYDRRRRCFPFVVHEGLLNLEDIESDSESEKLSSSSKSSSFQPWISNVICVDGEFSKHEDNMQRSSDKSLVYEALLQKLTFLDQDPIFGVSTGKIDVNLSKSVREAISLARNAPHGPPPLCSICQHKGPAFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLQDGQVVAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRMQNVLDWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDIGRPRGQQCLSEWARPLLEENAIDKLVDPSIGNFYVDQEVYRMMQCSSMCIRRDPHLRPRVSQVGNLINLHVYNLFIYYSSSSSIFVDWTN 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04806 695 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Mepo2g04806 695 MobiDBLite consensus disorder prediction 218 248 - -
Mepo2g04806 695 SUPERFAMILY Protein kinase-like (PK-like) 385 670 IPR011009 -
Mepo2g04806 695 ProSiteProfiles Protein kinase domain profile. 402 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04806 695 Gene3D Phosphorylase Kinase; domain 1 376 477 - -
Mepo2g04806 695 Pfam Protein tyrosine and serine/threonine kinase 406 668 IPR001245 GO:0004672|GO:0006468
Mepo2g04806 695 Gene3D Transferase(Phosphotransferase) domain 1 478 677 - -
Mepo2g04806 695 SMART tyrkin_6 402 672 IPR020635 GO:0004713|GO:0006468
Mepo2g04806 695 CDD STKc_IRAK 408 668 - -
Mepo2g04806 695 PANTHER OS01G0750732 PROTEIN 237 669 - -
Mepo2g04806 695 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Mepo2g04806 695 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 678 - -
Mepo2g04806 695 MobiDBLite consensus disorder prediction 211 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04806 Mepo-Chr2 56365010 56368590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04806 364 668 Trihelix Transcription Factor Family AT1G68690 51.456 1.29e-101 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo2g04806 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04806 - - aprc:113855006 1121.3