Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04805 ATGGGGAGAAGAAAGTGTTCACATTGTGGTAAGATAGGACATAATTGTAGAACATGCACATCCTTCACCCTTGGAGGACTTCGTCTCTTCGGGGTCCAACTATCATCTTCCTCATCATCATCTAGTACCATGATCAAGAAAAGCTTTAGCATGGACACCTTTCCCTCACCATCTTCTCCATCTTCCTCATTCTCTTCATCAACATCATTAACCAATATTGATGAAAATCATTATTACAAATCCACTACTAATATTGCATATCTATCAGATTGTTTTATAGGTCCACCCCAAGAGAGAAAGAAAGGAGTTCCATGGACAGAAGAAGAACATAGAATATTCCTTGTTGGGTTAGAGAAGCTAGGAAAAGGAGACTGGAGAGGAATCTCTAAAAACTTTGTCACTTCAAGAACCCCTACACAAGTTGCTAGCCATGCTCAAAAATACTTTCTCAGATTGGCTACTATCAACAAGAAGCGACGTTCAAGTCTCTTTGACTTGGTTGGGAGCAAGAACACCAACACAAAAGACCAAGGGCGTGCTAATTCAGTAGTAAATTTGGGTCATAAATTTGAGGATAAGTGTAAATGTGAAGTTGAAGTTAATGATGGCACCACTTTGTCCTACTTTAAACAAGAAGAAGCAGCCAAATCAGAAAAGCAAGAAAATAATTACTCTACAGCTAATTGGCTACATGACTCTTCAAATTGTGCAGCAGTGCCTAATTTGGACCTCACACTTTCGGTTGCATCCCCTAAGGCTTCTAATAAGACCAAGCTTGCACAAAATCAACCCTCCCCTGCTGCCTCATTCCTTCTTGGCCCAATTAGCGTCACTTAA 837 0.4026 MGRRKCSHCGKIGHNCRTCTSFTLGGLRLFGVQLSSSSSSSSTMIKKSFSMDTFPSPSSPSSSFSSSTSLTNIDENHYYKSTTNIAYLSDCFIGPPQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISKNFVTSRTPTQVASHAQKYFLRLATINKKRRSSLFDLVGSKNTNTKDQGRANSVVNLGHKFEDKCKCEVEVNDGTTLSYFKQEEAAKSEKQENNYSTANWLHDSSNCAAVPNLDLTLSVASPKASNKTKLAQNQPSPAASFLLGPISVT 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04805 278 SMART sant 101 151 IPR001005 -
Mepo2g04805 278 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Mepo2g04805 278 FunFam transcription factor MYB1R1 103 154 - -
Mepo2g04805 278 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Mepo2g04805 278 ProSiteProfiles SANT domain profile. 105 153 IPR017884 -
Mepo2g04805 278 CDD SANT 104 149 IPR001005 -
Mepo2g04805 278 Gene3D - 103 156 - -
Mepo2g04805 278 PANTHER TRANSCRIPTION FACTOR KUA1 3 238 - -
Mepo2g04805 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 153 IPR017930 -
Mepo2g04805 278 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
Mepo2g04805 278 NCBIfam myb-like DNA-binding domain, SHAQKYF class 100 151 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04805 Mepo-Chr2 56343831 56345877 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo2g04805 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04805 - - cam:101500241 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04805 2 56343831 56345877 Mepo2g04805 2 56343831 56345877 ECH