Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04802 ATGAGAACACTTGTTCCCATTCCAACCTTAATCTTCTCCATTGCTTCTGGATTCACTTCAGGTATCACCAACGAAACATTCTCATCCATTCAAAACGCAGAGCTATTATCAACAACTATGGTTCCACGATTCACCGCAATCAGACCAAACTCTTTACTGATTGACCCACCTGCGCTGAAGAGAGCAATGTTGACGCCGTCGAAACTCTCTGCCGTCAGCTCCTCCACCACGTACTCTTTATCTTCGAAGGTCATGCGGCAGCCAGAGGAGTGCTTTGATGTGAGCATTTTGATGGAGTTGTATGGGAAGTCGCGGTCTTCAGTTGGGTTGAAGAGAAGCGTAATCAAAGATTTCTTTTGTGAGAAGAGGATCAGATTAGGAAGCAATGAGATTTTGGACTCTGGTTGGAGAACCAATTGGAGAAGAGGAAAGGAATTTCATGGGATATGTTGTGTACCGAGTGAGGGTCACCAACTAGGGAGTTACCCAACTCAAGTTTCAAAGGAGCAAGAGGATTCTACCTTCAATTATTTTGAGGTTATTTTGGTTGATGTTGCTCACAGTGCTATAAGAAATGATCCCATAATCAATTGGCTCACCAACCCTGTCCACAAGCACAGGGAACTTTGTGGTCTCACTTCTGTTGGGAATTTTCTGCGGGTGTTAATCAATTCTGCAGGTTGTTTTGTGGGCTTGATGACATATACTGCTTGTTCTTGGGGAGTTTGA 729 0.4403 MRTLVPIPTLIFSIASGFTSGITNETFSSIQNAELLSTTMVPRFTAIRPNSLLIDPPALKRAMLTPSKLSAVSSSTTYSLSSKVMRQPEECFDVSILMELYGKSRSSVGLKRSVIKDFFCEKRIRLGSNEILDSGWRTNWRRGKEFHGICCVPSEGHQLGSYPTQVSKEQEDSTFNYFEVILVDVAHSAIRNDPIINWLTNPVHKHRELCGLTSVGNFLRVLINSAGCFVGLMTYTACSWGV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04802 242 PANTHER RIBOSOMAL PROTEIN L15 170 222 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo2g04802 242 SMART Ribosomal_L15e_2 95 241 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo2g04802 242 Pfam Ribosomal L15 170 223 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo2g04802 242 Gene3D Ribosomal protein l15e 164 228 IPR024794 GO:0003735|GO:0005840
Mepo2g04802 242 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 170 221 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04802 Mepo-Chr2 56323002 56324783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04802 171 222 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 69.231 6.83e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04802 K02877 - zju:107415690 85.5001