Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04791 ATGGCTGTTTCATCACTATCTCTTCCATTTCAATTCCGTTCTTCTCACAAATCACACACTCGCCGCAAATTCGTTTGCTTTGCGGCGGCGAGCACCGAGGTTCCCCTCCTCCAAGTCAAAGATCTTCGAGCCAAAATCGTTGAATCCAATGCCGAAATTCTCCGCGGCGTTAATCTCACTATCAACAGAGGCGAAATTCACGCTATCATGGGAAAAAACGGTTCTGGTAAAAGTACTTTCGCTAAGGTTCTTGTGGGTCATCCAGATTATGAAGTTACTAGTGGTACTGTTGTTTTCAAAGGGGAAAATTTGCTTGAAATGGAACCTGAAGAAAGAGCCCTTGAAGGTCTTTTCATGAGTTTTCAATCACCCGTTGCAATCCCCGGTGTTTCAAATGATCAATTTCTTGTTATGGCTTATAATGCTCGGAGAAAGAAACTTGGTCTTCCTGAACTTGGACCCCTTGAGTGTTTTTCTTATTTGATGGAGAAGCTACAACTTGTTAACATGAAGCCTGACTTTCTCAATAGAAATGTCAATGAAGGGTTTAGTGGAGGTGAACGAAAACGCAATGAAATCTTGCAGCTTGCGGTTTTGGGGGCAGATTTGGCTATTTTGGATGAAATTGATTCGGGATTGGATGTTGATGCGCTCAGGGACGTGGCAAGTGCAGTTAATAAAATTCTTACCCCGGAGAATTCTCTGCTGATGATTACTCACTATCGACGAATTCTTGATCTTTTGAAACCTTCGCATGTCCATGTCATGGACAACGGAAAAATTGCAAGGACAGGCGACCTATCTATGGTAGATGCAATTGAGGCAGATGGATATGAACCGGTCTCTGTTTTAACTTAA 858 0.4266 MAVSSLSLPFQFRSSHKSHTRRKFVCFAAASTEVPLLQVKDLRAKIVESNAEILRGVNLTINRGEIHAIMGKNGSGKSTFAKVLVGHPDYEVTSGTVVFKGENLLEMEPEERALEGLFMSFQSPVAIPGVSNDQFLVMAYNARRKKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVASAVNKILTPENSLLMITHYRRILDLLKPSHVHVMDNGKIARTGDLSMVDAIEADGYEPVSVLT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04791 285 Pfam ABC transporter 54 208 IPR003439 GO:0005524
Mepo2g04791 285 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 283 IPR003439 GO:0005524
Mepo2g04791 285 NCBIfam Fe-S cluster assembly ATPase SufC 37 279 IPR010230 GO:0005524
Mepo2g04791 285 CDD ABC_FeS_Assembly 37 278 IPR010230 GO:0005524
Mepo2g04791 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 267 IPR027417 -
Mepo2g04791 285 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Mepo2g04791 285 Gene3D - 36 282 IPR027417 -
Mepo2g04791 285 SMART AAA_5 63 260 IPR003593 GO:0016887
Mepo2g04791 285 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 25 281 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04791 Mepo-Chr2 56201505 56205117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04791 52 277 Calmodulin-binding Proteins AT2G36910 24.583 1.40e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04791 K09013 - gmx:100811883 433.721