Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04790 ATGAGAGGAAAGGGATTGATTGTGCCACCGTGTTATTCTCGTGGCGGAAAAATACTTCAGACAGAGAAAGTTGATGCTACTTCATCTTCGAGCTATGAAATGATACTTAACGGAAATGGTAAGAAAAATCGAAAACGTAAAAGTCTTCAGGAATTGTATACAACAGGTGACATTGTGAACACCGTGTTGCTGAATGATGATGCTCCTACTCTGGGAAGTGAATTTGATTCTCTTCCTTCAGGACCCAAAAATTACAGTTCTGCTTGTCAACAGGACCAAGAGCCTGTCAAAAGGAGAAAGGCTTCCAAGAGTGCAATTCAAAGTCACTCTAATTGTAACATGAAAGCACCTGTGGAGAGACATGGTATGGGCAAAGGTCTGGCAACAAATCCTAATTCTAAGATGAAGGCACCTGTGAAGAGACATGGTATGGGCAAAGGTCTGGCAACAAATCCTAATTGTAATATGAAAGCACCTGTGAAGAGACATGGTATGGGGAAAGGGCTGGCAGCAAATCCTAATTGTAATATGAAAGCACCTGTGAAGAGACATGGTATGGGCAAAGGTCTAATGACAATTTGGAGGGCAACAAATCATGATGCTAGAGACCTTCCAATCAGTTTTGGTTCTGTTGACAAGGAAGTTCATCTAACCTCTAATACTAAAACACCGATATCGGTCAACAGGTCACAGAAAGCAGTAACCATGAATGGAAAGCCAAGAAATAAAATGCCGAATAAGAAAGCTACATTACAGGGGAAAAGGAAACATTTCGTGAAAAAAATAGTGGGTGAATCAAACCAGTATGCAACTCAGATCCAGCCTCCCATAGAAAAATGTGAACTTGATTTAGATAGCTCAATATCTGAGGCAGGAGTTGATCAAATTTCAATGTTAATTGATGATGAAGAGTTAGAGCTGAGAGAGTTACAAGAAGGTACCAATCTGCTTATCTGTTCAGATCAACTTGCTGCCAATGGAATGCTTGGTGGCTCACTTTGTCCAGATGTGCTAGTCAAGTTCCCCCCAGGTGCTGTCAAGATGAAAAAACCTATACATTTGCAACCTTGGGACTCCTCCCCGGAACTGGTGAAGAAATTATTTAAGGTGTTCCATTTCATTTATACATATGCTGTAGTTGTTGATGTTTGCCCCTTTACCCTTGATGAGTTTGTTCAGGCTTTTCATGATAAGGACTCGATGTTACTTGGACAAATTCACGTAGCCCTTCTCACACTGCTTCTATCTGACATTGAAGTGGAGCTTTCTAATGGGTTCTGTCCTCATTTAAATAAGTCATGCAACTTTCTTGCGTTACTTCACTCCGTTGAAAATCAAGAATACTCTCTTGACGCTTGGAGAAGATCTCTAAATCCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTGGTAGCTGCTGGATTCGGTTCCAAGCAAGGTGCCTTTCAAAGAGAGGGCCTTGGCAAGGAATTGGATATTCTTGTAAACTATGGCCTATGCCCTGGCACCTTGAAGTGCGAGTTGTTTAAAATCTTGTCCGAACGAGGTAACAATGGATGCAAAGTTTCTGAGCTGGCAAAGTCAATGCAGATTGCAGAATTAAACCTTTCCAGCACAACTGAGGAACTAGAGTCTTTAATATATTCCACACTTTCAAGTGATATTACTTTATTTGAAAAAATTTCCTCCTCTGCATATCGACTGCGTATGAGCACTGTTGCAAAGGACGATGATGATTCTCAGTCAGATACAGAGGACTCCGGTAGTGTTGATGACGAGCTTAACGACTCTGATACATGTAGCAGCGGAGATGATTTTGGAAGCGGTTTGATACACTCTAATATAAGAAAATTGCGACGTCATAACAGTCGTAAAGCTAAACATAATAAGCTGAAAGTTTACACTGAAATTGATGAGAGCCATGCAGGAGAAGTGTGGTTGTTAGGACTTATGGACAGTGAATACTCCGATTTGAAAATTGAAGAAAAATTGAATGCATTGGCAGCGTTAACTGGTCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAGTAAAAGTTACTGCTGATTGTAGCTCTAGCATCCAATTACGTGGTTCTGGAGCAAAAATTAAGAGATCAGTAAACCCAATTGAACAAATGCAATGTATTAAAGAGGTGCACTTGAATTCTCACGCCTGTCCAGTAGATTCCTCATTGTTAGTCTCAAAGTTCCATATTCAGGAGGCTTCCTTGGAGAAAAGAAAAGTTTCAGCTTATTCACACCCTATACAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATATTGGCTCTTCTTGGGCCCTTGTAATATAGATGATCCTGGCCACAGGAGGGTTTACTTTGAATCCTCTGAAGATGGTCACTGGGAGGTGATTGATACAGAAGAGGCGTTGTGTGCTTTGTTGTCAGTTCTGGATGATAGAGGGAAGCGCGAGGCTCTTCTTATTGAATCTTTGGAGAGACGACAAACATCTCTATGCAGATCTATGTCCAGGATTAAGGTTAGCAATATTGGAATGGGGTGTATGTCACATTCTGACCAGTCTGAGCTGGATAGGGTTACAGAAGACAGCTGTTCTCCAGTATCTGATGTAGACAACCTGAATCTGACTGAGATTACAGACTATTTGCCGTCACCTGGGGCCGTGGTAATTGAAGCTGGGAAGAAGGAAGATGAACAACTGCATAAATGGATCCGTGTTCAAGAATATGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGCAGAAGGTCATATCTTGATTCTCTCGCCAGATGTAGGAGTTGCCATGATCTATACTGGAGAGATGAAAGACACTGTAAAATTTGCCATACGACATTTGAGCTTGATTTTGACCTTGAAGAAAAATATGCAATCCACATAGCCATGTGCAGGGAGAAAGAAGACAGGAATACATTTCCAAATCATAAAGTCTTGCCATCACAGATTCAATCATTGAAAGCTGCAATTTATGCAATTGAGTCTGTTATGCCCGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCTCATAATCTATGGATCAAAAGGCTTAGACGCACCTCGACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAATGACAGCTGGTTATTTCAGTGCAAATTTCCAGACGGTGTAGTTGAAGAAACCATTGCATCTTTTGCATCAATGCCCCATACTTCATCTGCCCTTGCTCTGTGGTTGGTGAAGTTAGATGCCATAATTGCTCCTTATCTGGACAGAGTCCAAACTCAGAAGTCACAGGGAATCGGTAAGCATGGTTCTCGGTGA 3360 0.4134 MRGKGLIVPPCYSRGGKILQTEKVDATSSSSYEMILNGNGKKNRKRKSLQELYTTGDIVNTVLLNDDAPTLGSEFDSLPSGPKNYSSACQQDQEPVKRRKASKSAIQSHSNCNMKAPVERHGMGKGLATNPNSKMKAPVKRHGMGKGLATNPNCNMKAPVKRHGMGKGLAANPNCNMKAPVKRHGMGKGLMTIWRATNHDARDLPISFGSVDKEVHLTSNTKTPISVNRSQKAVTMNGKPRNKMPNKKATLQGKRKHFVKKIVGESNQYATQIQPPIEKCELDLDSSISEAGVDQISMLIDDEELELRELQEGTNLLICSDQLAANGMLGGSLCPDVLVKFPPGAVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGQIHVALLTLLLSDIEVELSNGFCPHLNKSCNFLALLHSVENQEYSLDAWRRSLNPLTWIEILRQVLVAAGFGSKQGAFQREGLGKELDILVNYGLCPGTLKCELFKILSERGNNGCKVSELAKSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGLIHSNIRKLRRHNSRKAKHNKLKVYTEIDESHAGEVWLLGLMDSEYSDLKIEEKLNALAALTGLLSSGSSIRMKDPVKVTADCSSSIQLRGSGAKIKRSVNPIEQMQCIKEVHLNSHACPVDSSLLVSKFHIQEASLEKRKVSAYSHPIQSVFLGSDRRYNRYWLFLGPCNIDDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRSMSRIKVSNIGMGCMSHSDQSELDRVTEDSCSPVSDVDNLNLTEITDYLPSPGAVVIEAGKKEDEQLHKWIRVQEYDSWIWNSFYLDLNVVKYGRRSYLDSLARCRSCHDLYWRDERHCKICHTTFELDFDLEEKYAIHIAMCREKEDRNTFPNHKVLPSQIQSLKAAIYAIESVMPEDALVGAWRKSAHNLWIKRLRRTSTLVELLQVLADFVGAINDSWLFQCKFPDGVVEETIASFASMPHTSSALALWLVKLDAIIAPYLDRVQTQKSQGIGKHGSR 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04790 1119 MobiDBLite consensus disorder prediction 77 92 - -
Mepo2g04790 1119 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 759 832 IPR028941 -
Mepo2g04790 1119 PANTHER HOMEOBOX PROTEIN SIX 252 1108 - -
Mepo2g04790 1119 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 641 681 IPR028942 -
Mepo2g04790 1119 ProSiteProfiles DDT domain profile. 361 420 IPR018501 -
Mepo2g04790 1119 MobiDBLite consensus disorder prediction 125 154 - -
Mepo2g04790 1119 Pfam DDT domain 362 417 IPR018501 -
Mepo2g04790 1119 Coils Coil 293 313 - -
Mepo2g04790 1119 MobiDBLite consensus disorder prediction 73 96 - -
Mepo2g04790 1119 SMART testlast3 361 420 IPR018501 -
Mepo2g04790 1119 MobiDBLite consensus disorder prediction 574 601 - -
Mepo2g04790 1119 MobiDBLite consensus disorder prediction 579 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04790 Mepo-Chr2 56186782 56199927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04790 299 1098 Homeobox Transcription Factor Family AT1G28420 26.721 1.72e-72 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mepo2g04790 WSD 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04790 - - mtr:112417546 2147.86