Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04781 ATGGCACTCGTCACTCATATTATGAACAATAAAACCATATTCATCACATTCATTCTCTTGTTTTGTGTCGTTTCGTCATCTTATGGTGCTTCTGACTCTGAATTGCTCCTCAAGGTAAAGGACAATCTTGAAAAAAACCCTGAGGTATTGTCAACATGGAACACATCAACCACACCTTGTAATGGTGATCATGCCAATTGGCGTGGCGTTCTTTGTTATCAAGGAAAAGTTTGGGGATTGAAGCTTGAGAATATGGGGCTAAAAGGTTTCATTGATGTGAATTCTCTTAGGGAGTTACCATATCTTAGAACGCTTAGTTTCATGAATAATGATTTTGAGGGTGGTTGGCCTGAGATTAATAAACTTTTTGGTCTTAAATCGCTTTATCTGTCAAATAACAAATTTTCTGGAGAGCTTCCTTGGGATGCTTTTGACGGTATGCAGTGGTTAAAGAAAATTCATTTGTCAAATAATCAGTTTACAGGTACTATTCCATCTTCTGTGTGTTTGATGCCAAAGCTTATGGTTTTGAGATTGGATGGAAACAAATTCACTGGACCTATTCCTCGATTTACAACAGAATCCAAATTGAAAACAATCAATGTAGCTAATAATCAGTTGCAGGGACCAATACCAGCCGCTCTTAGTAAAATCGCCGCTTCTTCCTTTTCCGGTAATGAAAATTTATGTGGAGCACCATTGGCTGCATGTCCTACAAAGAAGGCATCAATTGCAAGTATTTGTGTGGTTGTTGTGGTTGTTTGTGTAGCACTGGCTGTGATTGGAGTTACTGTGTTTTTCATCCTACACCGGCGGCGAAGACACCGAGAGCCATCATCGACTCTAGAGAATCCACCTTCAGGCCACTACAACAACAAAAAAGTTGGAAGTGAAAGAGATATTGATGATGAAAGTAATAGATCATCAAGATCAATGAGTTCCAACCACAGTAGAAGAAATGATCACATGAAGTTGTCTTTTATAAGAGATGACAGAGAGAGGTTTGATTTGCAAGAGTTGCTGAGAGCTTCTGCTGAGATTTTGGGAAGTGGTTTTTATAGTTCTTCTTACAAGGCTTCTTTGACGAATGGGCCAACAATAGTGGTGAAGAGGTTTAAGCAAATGAACAATGTAGGGAAGGAAGAGTTTCAAGAGCATATGAGAAGGATTGGAAGGTTGAACCATCCTAATTTGATTCCTCTTGTTACTTACTATTATAGAAAAGAAGAGAAGCTTTTGGTTACTGACTTTGTTCAGAATGGTAGCCTAGCTGTTCGCCTTCATGGACACCAAGCACTAGGGGAACCAAGCCTTGATTGGCCAATAAGGTTGAAAATTGTGAAAGGCATAGCAAGAGGTCTTGAAAATCTATACAAAGATATGCCAAGCCTAATTGCACCTCATGGAAATCTCAAATCTGCAAACGTACTTCTCACTGAAACATTTGAGCCACTTCTCACAGATTTTGGATTAGTACCAGTAACAAACCAAGAAATGGCCAAGGAAATAATGGTAATATACAAATCACCTGAGTATTTGCATCATGGAAGAATCACAAAGAAAAGTGATGTTTGGTGTCTTGGAATATTAATATTGGAGATTTTAACTGGTAAACTTCCAGCTACATTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAATTGGGTGATTTCAGTAGTACCTGAGGAGTGGAATAGTTCAGTGTTTGATAAAGAAATGGGTGCAACAAAGAATGGTGAGGGAGAGATGGGAAAGCTTTTGAAGATTGCATTGAGTTGTTGTGAAGTGGATGTTGATAAAAGATGTGATTTGAAAGAAGCTGTTGAGAAAATTCAACAAGTGAAAGAGAGGGATAATTCATGA 1869 0.3842 MALVTHIMNNKTIFITFILLFCVVSSSYGASDSELLLKVKDNLEKNPEVLSTWNTSTTPCNGDHANWRGVLCYQGKVWGLKLENMGLKGFIDVNSLRELPYLRTLSFMNNDFEGGWPEINKLFGLKSLYLSNNKFSGELPWDAFDGMQWLKKIHLSNNQFTGTIPSSVCLMPKLMVLRLDGNKFTGPIPRFTTESKLKTINVANNQLQGPIPAALSKIAASSFSGNENLCGAPLAACPTKKASIASICVVVVVVCVALAVIGVTVFFILHRRRRHREPSSTLENPPSGHYNNKKVGSERDIDDESNRSSRSMSSNHSRRNDHMKLSFIRDDRERFDLQELLRASAEILGSGFYSSSYKASLTNGPTIVVKRFKQMNNVGKEEFQEHMRRIGRLNHPNLIPLVTYYYRKEEKLLVTDFVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIARGLENLYKDMPSLIAPHGNLKSANVLLTETFEPLLTDFGLVPVTNQEMAKEIMVIYKSPEYLHHGRITKKSDVWCLGILILEILTGKLPATFLQQGKGSEVSLANWVISVVPEEWNSSVFDKEMGATKNGEGEMGKLLKIALSCCEVDVDKRCDLKEAVEKIQQVKERDNS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04781 622 Gene3D Ribonuclease Inhibitor 192 238 IPR032675 -
Mepo2g04781 622 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Mepo2g04781 622 ProSiteProfiles Protein kinase domain profile. 342 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04781 622 MobiDBLite consensus disorder prediction 293 319 - -
Mepo2g04781 622 Coils Coil 606 622 - -
Mepo2g04781 622 SUPERFAMILY L domain-like 31 233 - -
Mepo2g04781 622 MobiDBLite consensus disorder prediction 276 319 - -
Mepo2g04781 622 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Mepo2g04781 622 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04781 622 SUPERFAMILY Protein kinase-like (PK-like) 346 614 IPR011009 -
Mepo2g04781 622 FunFam Nuclear pore complex protein NUP107 29 190 - -
Mepo2g04781 622 FunFam pollen receptor-like kinase 1 310 417 - -
Mepo2g04781 622 Gene3D Phosphorylase Kinase; domain 1 307 417 - -
Mepo2g04781 622 Gene3D Transferase(Phosphotransferase) domain 1 418 621 - -
Mepo2g04781 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 620 IPR046959 -
Mepo2g04781 622 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04781 Mepo-Chr2 56111584 56114976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04781 12 620 Receptor kinase-like Gene Family AT5G35390 51.730 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo2g04781 Pkinase 9.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04781 - - gmx:100804368 888.641