Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04778 ATGGGGATTTGCTTCAGCATCATTGAACAAGAACATAATCACATTTCTCTTTCCGATTCTAAACCTAAATCCGCAGTTGGAAATGATTCCGGTGCACGAACGACTCCATTAGGTACTGGTTCCATGAATATCAAAGAACTTCGCGAAGGTGCTGGATACAGAAACGTTCACATTTTTACTTACAACGAATTGAGACTCGCTACCAAACAATTTCGACCCGATTTCATTTTAGGAGAAGGTGGATTTGGTGTTGTGTATAAAGGTGTTATAGATGATAGTGTAAGGGCTGGTTATAAATCCACTGAAGTCGCCATTAAAGAACTTAACCGCGAAGGATTTCAAGGCGATCGTGAATGGCTCGCTGAAGTTAACTATTTGGGTCAATTCAGTCACCCGAATCTCGTAAAGCTATTTGGATACTGCTGTGAGGATGAACACCGGTTGTTGGTCTATGAATACATGGCTAGTGACAGCTTGGAGAAACATCTTTTTCGCAGAGCGGGCTCAACATTGACTTGGTCTAAAAGAATGAAGATTGCTTTGCATGCTGCAAGAGGGCTTGCTTTTCTTCATGGTGCAGAAAGGCCTATCATATATCGCGACTTCAAGACATCAAATATCTTACTAGATGCGGATTTCAATGCAAAGCTTTCAGACTTTGGCCTTGCAAAGGATGGGCCGATGGGGGACCAAACACATGTTTCAACTCGAGTAATGGGCACATATGGATATGCTGCTCCGGAGTATGTCATGACTGGGCATTTGACTGCTCGAAGCGATGTGTACGGTTTTGGAGTGGTGCTACTGGAATTGCTTATTGGTAGGAGAGCACTAGACAAGAGTAGGCCTAGCCGAGAGCACAACTTGGTTGAATGGGCTCGCCCGTTGTTGAATCATAATAAAAAACTTCTGAAAATTTTAGACCCGAAAGTTGAAGGGCAATATTCAAGTAAAACTGCAACAAAGGTGGCCCTTTTAGCATACCAATGTCTTAGCCAAAACCCGAAAAGTAGACCTCTTATGAGCCAGGTTGTTGAAATCCTTGAAAACTTTCAGTCAAAGGAGGAAAATGAGGAAGATAAAATCCTTCAAAGTGGTGGTAGCAGTGTAACCATTTATGAGGTTCCAAAGGGCAGCAATGACACTCCAACTAAGAGCTAA 1161 0.4264 MGICFSIIEQEHNHISLSDSKPKSAVGNDSGARTTPLGTGSMNIKELREGAGYRNVHIFTYNELRLATKQFRPDFILGEGGFGVVYKGVIDDSVRAGYKSTEVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLFGYCCEDEHRLLVYEYMASDSLEKHLFRRAGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKVEGQYSSKTATKVALLAYQCLSQNPKSRPLMSQVVEILENFQSKEENEEDKILQSGGSSVTIYEVPKGSNDTPTKS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04778 386 MobiDBLite consensus disorder prediction 358 386 - -
Mepo2g04778 386 PANTHER OS01G0588500 PROTEIN-RELATED 51 352 - -
Mepo2g04778 386 ProSitePatterns Protein kinases ATP-binding region signature. 77 106 IPR017441 GO:0005524
Mepo2g04778 386 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Mepo2g04778 386 Pfam Protein tyrosine and serine/threonine kinase 77 348 IPR001245 GO:0004672|GO:0006468
Mepo2g04778 386 FunFam Serine/threonine-protein kinase BIK1 39 153 - -
Mepo2g04778 386 SUPERFAMILY Protein kinase-like (PK-like) 53 349 IPR011009 -
Mepo2g04778 386 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Mepo2g04778 386 MobiDBLite consensus disorder prediction 19 40 - -
Mepo2g04778 386 MobiDBLite consensus disorder prediction 18 40 - -
Mepo2g04778 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mepo2g04778 386 ProSiteProfiles Protein kinase domain profile. 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04778 386 MobiDBLite consensus disorder prediction 363 386 - -
Mepo2g04778 386 CDD STKc_IRAK 77 351 - -
Mepo2g04778 386 FunFam Probable serine/threonine-protein kinase PBL8 154 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04778 Mepo-Chr2 56069036 56073818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04778 43 348 Glycoside Hydrolase AT3G07070 49.515 4.25e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo2g04778 PK_Tyr_Ser-Thr 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04778 - - gmx:100800465 677.552