Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04746 ATGGCTTCAACTCCCAAGAAGCTCCTTCAATCCCCCTCCTCAAAATCCAACATCCGTTCACAATTCTCACCTCTCACTCCTCATTCCTTACCTACACGTAGATCCACGCGCTTGAACTCCGATTCTCCCATAACCCCTAATCTCGTTGCCGAATCTCAAATTCAACAATCAACTCCGAAAAGAGGGAGAAGAATCGGTGAGAATTCTGTTCCGGCTGCGAAATCTCGTCTTGATTTCACTAGAAAAGATAAAGCCGTAACTCACAATAGTTCAATTAAAGTAGAAAATGAAATTGATTCTGCTCAATTTCTGAAGAAGAGAAGTCGAAAAGCTGAATCTGATGAAATTGCATTTGCTCCAAAATCGCCAGATTCATCGAAATCTGTAAAGAAGAGGAAGGAGGAAGGTGAAAAAACGGTTGAATTGAAGAAGAGAAATGGGAAGGGAGATTCTGTTAAGGTTTTGTTCGCTCCGATGTCGCCGGATCAATCGGAAACTAAGAAGAGAAAGAGGAAGAACGAGGTTAAGGTTGAGAAAACGGTTGTTACAAGAGCTGGGAGAAAAGGTGGAAAGATTGCGAAGGTGCAGTATTACAAGAAAGTTGTTTATGACGGCGGTGAATTTGAAGTTGGGGATGATGTTTATGTGAAGAGGAGAGAAGATGCTACTTCTGACGAGGAAGATCCTGAAGTGGAGGAATGTAGGTTTTGTTTTTGTTCTGGGAACGAAATCATGATTGAGTGTGATAGTTGTTTGGGTGGGTTTCATTTGAAATGTTTGACGCCGCCGTTGAAAGGTGTTCCTGAAGGGGATTGGATCTGTGGGATCTGTGAGGGTCGTAAGATGGGTAAAGATGTTGATTTTCCAAAGCCGCCGAAGGGTAAGAAGCTTGTTAGAACAATGCGTCAGAGGCTTCAATCAAGTGATTTGTGGGCTGCTCGCATTGAGAGTATATGGAAAGAAGTGGATGGCAGCTACTGGTGTCGGGTACGGTGGTATATGATCCCAGAAGAGACTTCTGTTGGGCGACAACCACATAATTTGAGCAGGGAGCTATATCGGACCAACGACTTGGCCAACATTGAGATGGAATCTGTCCTTCGACATTGCTATGTCATGATCCCTAAGGAGTATGCCAAAGCTAGCAATGAGGGAGATGATGTTTTCTTGTGTGAATATGAATATGACATCCAGTGGCACAGTTTCAAACGCTTGGCTGACATTGATGATGAGAGAGAGAATTCTGATGAGAGTGACGGTGACGAAGACTGGAACATCGACAAGGAATCAGACTCTGACACAGATGAAGATGTTGAATATGATGAGGAAAATATTAAAATTGCACAATCGCAACCACCGACAAGCCATCAGTTAGCTGCAAATCTGCACAAGGGACGGTTCTTTGGACTTCAGAAGATAGGCACAAAAAGAATTCCAGAGCATATAAGGTCTCACAAACAGACTAATCTTGAAAGAGCAAAGGCATCACTGCTGTTAGCTTCGCTGCCTAAGTCTTTACCTTGTAGAAATAAAGAAATGGACGAGATAACTACATTCATCAAAGGTGCTATTTCTGACAATCAATGTCTGGGGCGTTGCCTCTATATTCACGGTGTTCCGGGCACTGGCAAGACAATGAGTGTACTCTCAGTGATGAGGAGTTTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCATACTGTTTTGTGGAGATCAATGGTCTGAAATTGGCTTCACCAGAGAATATTTACAAGGTCATATATGAAGCATTAAATGGACACAGGGTCGGATGGAAAGAGGCTCTCCGTTTGCTAAATGAGAGGTTTGTAGATGGGAAGAAAACTGGAGAAGAGGCTGACCGACCATGTATTTTGCTCATTGACGAACTTGATCTTCTTGTAACCAGAAACCAATCGGTTCTGTACAATATCCTTGACTGGCCAACCAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACAATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGCATCCAGAGGCTTTGCTTTGCTCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAATGGAATTGATATATTTGAAAAACAGGCCATGGAATTTGCTTCAAGAAAGTTTAGTCTCCAAGTTGCAGCTATATCGGGAGATGCACGTCGTGCTTTGGAAATATGCAGACGTGCAGCTGAAATTGCAGATTATCGAATAAAGAAGCTAGCTTCAGATCCTGATAATGTTGCTGCAGGAAAGGGACTTGTTGGCATGGCAGATGTTGAATCAGCTATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAACTGTTCCAGACTTGGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGTGGCAGCAATGGTGAAGTGTTTCCTGGACATGATATTCTCCTGCAAGTTGGCTGTAAGTTGGGTGAGTGTAGGATCATTTTGTGTGAAGCAGGTGCCAAGCACAGGTTGCAAAAGTTGCAGCTCAATTTCCCGAGTGATGATGTTGCCTTTTCGCTGAGAGACTGCAAAGATCTACCTTGGCTGTCCAAATATCTAATGACCGTTGGATTACGTAGGTCTATTGAATGTTACGGTGAATCAACAACATCTAATTAA 2730 0.4278 MASTPKKLLQSPSSKSNIRSQFSPLTPHSLPTRRSTRLNSDSPITPNLVAESQIQQSTPKRGRRIGENSVPAAKSRLDFTRKDKAVTHNSSIKVENEIDSAQFLKKRSRKAESDEIAFAPKSPDSSKSVKKRKEEGEKTVELKKRNGKGDSVKVLFAPMSPDQSETKKRKRKNEVKVEKTVVTRAGRKGGKIAKVQYYKKVVYDGGEFEVGDDVYVKRREDATSDEEDPEVEECRFCFCSGNEIMIECDSCLGGFHLKCLTPPLKGVPEGDWICGICEGRKMGKDVDFPKPPKGKKLVRTMRQRLQSSDLWAARIESIWKEVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDLANIEMESVLRHCYVMIPKEYAKASNEGDDVFLCEYEYDIQWHSFKRLADIDDERENSDESDGDEDWNIDKESDSDTDEDVEYDEENIKIAQSQPPTSHQLAANLHKGRFFGLQKIGTKRIPEHIRSHKQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISDNQCLGRCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVGWKEALRLLNERFVDGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAMEFASRKFSLQVAAISGDARRALEICRRAAEIADYRIKKLASDPDNVAAGKGLVGMADVESAIQEMFQAPHIQVMKNCSRLGKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCGSNGEVFPGHDILLQVGCKLGECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLMTVGLRRSIECYGESTTSN 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04746 909 SUPERFAMILY FYVE/PHD zinc finger 224 281 IPR011011 -
Mepo2g04746 909 FunFam Origin recognition complex subunit 1 297 489 - -
Mepo2g04746 909 Gene3D - 166 422 IPR043151 -
Mepo2g04746 909 FunFam Origin recognition complex subunit 1 487 686 - -
Mepo2g04746 909 ProSitePatterns Zinc finger PHD-type signature. 234 277 IPR019786 -
Mepo2g04746 909 MobiDBLite consensus disorder prediction 410 440 - -
Mepo2g04746 909 Pfam ATPase family associated with various cellular activities (AAA) 535 680 IPR003959 GO:0005524|GO:0016887
Mepo2g04746 909 MobiDBLite consensus disorder prediction 1 63 - -
Mepo2g04746 909 Pfam AAA lid domain 709 745 IPR041083 -
Mepo2g04746 909 ProSiteProfiles Zinc finger PHD-type profile. 234 280 IPR019787 -
Mepo2g04746 909 SMART AAA_5 530 684 IPR003593 GO:0016887
Mepo2g04746 909 SMART PHD_3 236 278 IPR001965 -
Mepo2g04746 909 MobiDBLite consensus disorder prediction 412 440 - -
Mepo2g04746 909 SMART BAH_4 206 406 IPR001025 GO:0003682
Mepo2g04746 909 FunFam Origin recognition complex subunit 1 683 779 - -
Mepo2g04746 909 Gene3D - 684 760 - -
Mepo2g04746 909 MobiDBLite consensus disorder prediction 125 140 - -
Mepo2g04746 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 748 IPR027417 -
Mepo2g04746 909 Gene3D - 486 683 IPR027417 -
Mepo2g04746 909 FunFam Origin recognition complex subunit 1 229 296 - -
Mepo2g04746 909 ProSiteProfiles BAH domain profile. 289 406 IPR001025 GO:0003682
Mepo2g04746 909 MobiDBLite consensus disorder prediction 1 91 - -
Mepo2g04746 909 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 338 885 - -
Mepo2g04746 909 Pfam PHD-finger 236 278 IPR019787 -
Mepo2g04746 909 Pfam BAH domain 313 404 IPR001025 GO:0003682
Mepo2g04746 909 MobiDBLite consensus disorder prediction 105 140 - -
Mepo2g04746 909 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 295 IPR013083 -
Mepo2g04746 909 MobiDBLite consensus disorder prediction 76 90 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04746 130 890 Core DNA Replication Machinery Family AT4G14700 66.362 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo2g04746 AAA 1.2e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04746 K02603 - gmx:100798547 1285.01