Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04739 ATGGAATCAGATTTCGAGACGAACGATATGCTCACACTTTCACAGAATCCATTTGATGATGCTAACGACAATGATAATTTGGATGTTGAAGGGGAAACATGTGGAATATGTATGGATATGGTTATTGACAGGGGAGTATTGGATTGCTGTCAGCACTGGTTCTGCTTTGTATGTATTGACAACTGGGCTACCATCACTAATCTCTGCCCACTTTGCCAGAATGAGTTTCAGTTGATCACTTGTGTTCCAGTATACGATACCATAGGGAGCAATAAAGTTGAAGATGGCTCATTCTTCAGAGATGATGACTGGTCGATTGACGGGAAGAATAACAGTCTGTCATTTCCCTCTTACTACATTGATGAAAATGCAGTTACTTGCTTGGATGGTGATGGCTGCAAAATTCGAAATGGATTTGCAAGCGTTGAAGAAGATTCTGGTCTTGATACATCAATTGCTTGCGACTCATGCGATCTATGGTATCACGCCTTTTGTGTGGGATTTGATACTGAAGGTACATCTGACAGTACGTGGTTATGCCCAAGATGCGTGGTTGATGCAGTTTCTAAAGAAACAGATGGCAATTCAATAAAGGAGGCTTCCTTGGAATGTAACCCAGATAATAATAACAGTGAATGTCATGCCGGAATAGTGTCTGTGTCCATTGCTGATGCAGGAGAGACAGCTGTGGTTGTCTCAATGGTTGACCGAAACAAATGGATTACAGAAACAAGTGAGAGAGGCCTATTGCCTCCTGAAGTTGATGGGGATCTGTTGAATGAGCCATGTAAGTTAATGTCGGACACAAATAATCAGCTGCAGGCAACAGAGAAGACAAATGTGTCACCGATCATGAAGGGAGAAGAACTAGAGCTTTCATTATCACACCCAACTTCTAAATCCTTCATGCATAGCGATATAAAGGAAAGTGATAATGGAACAAGATGTGAACCGAGTAGCTTTGATGGAACGAAGTTATTTGATGAGTCCAATGCCAAAACTAGTCCATGCAAAATTGAATCTGATATGGGTCTTCATCTTGGTTTATCGGTGGGCTCTTTTTTAACTGTGGATAATGTGGACAAGAGCGAATCAAAAGATCAAGCAACTGATCCCCCGTGCTCGATTCCAGAAGAGTTTCCTTTGGAAGGTGATAAACTCGAAATCAATGCTTGTGATGACAGTGCCAGAGTGGCTGGTAGAAAGAGGAAGCAATTAGATTACAGTCATGAGCAAGTTCGTATAAAAGTTGAGGATGAAGATGCCAACCCCGAATTATCGGTTGAAGCTTCACAAAAGAAAACCAGAATAGCTGCTAGTCAGGTGTTTAGAGCTAATGATTCGGTCGATGCTCAACTTTCTGGCAATGCTAAGAAAAGTCCTGTTTTAAAACATTCTCCAACAAAGGAGATTGCAGCATCAGATATAATGAATATAGTTAAAGGGACGAACCGTAGGCTTTCCAAGGGACTTGCTGACACTAATGCTAGTAAAAAGTTAGCTGAAAAGAAAGAAAACATGACTGGGTTGAGGGTTAAAAAGATTATGAAGAGAGTTTCTGATGATGGAGAATCATCCTCACTAGTCCAAAATCTAAGGAAGGAAATTAGAGAAGCTGTCCGCAACAAATCCTCTATAAACTTTGAGGAAAACCATTTTGATAAAAATCTTCTTGAAGCCTTTAGGGCTGCTATAACAGGGCCTAAAACTGAACTTGTAAATAAGTTATCCCCTTCAGCTTTGAAGGCAAAGAAGTCAATGTTGCAGAAAGGAAAAGTACGTGAAAATTTAACAAGGAAAATTTTTGGGACATCCAATGGTAGAAGAAAGCGTGCATGGGATAGGGATTGTGAAATTGAGTTTTGGAAATATCGTTGCATGAGAGCTTCAAAGCCTGAAAAGGTCGAAACCTTAAAATCAGTTCTTGATCTTCTAAGAAAAAGTTCAGAGAACCCAGAATCAGAGCGAGCTCCCGAATGTCAGGCCAAGAATCCAATTCTTTCCAGATTGTATATAGCAGATACATCTGTTTTCCCACGGAAAGAGGATGTCAAACCTTTCTCGGAGAAGACTAAACAAAATAATCCGTCAGCAAAAGGACCAAATCAATCTGTTGATAACAAGACTATTAAAGCAACAGAGGTAAATAATCTCTTATCAATGACCAGAGTTTGTTTATCTGAGAAAAAAGTAGATAAGATTGTACGTGGTCCAGCTGGTAAAGTACAATTAAGCAGTCGCTCGGAAGGGGCATCAGTTTCTTCTTCAGCTGGTGCTAAAGTTGGCACAAAGGAATCCAGCCTTAAATCTGATTCTGTGAAAGGCGATAAAAGAAAGTGGGCCTTGGAGGTTCTGGCGAGGAAAACAGCTGTTGCAAGCAAGAACACGGCAAATGAAAGTCAGGAAGATGATGCAATTTTTAAGGGAAATTATCCTTTGCTTGCCCAATTACCAACTGATATGAGACCGGTGTTGGCACCTTGTCGCCACAATAAAATTCCTGTATCCGTGAGGCAGACACAGCTGTACCGCTTGACGGAACGCTTATTGAAGAACACAAATCTGCCAATCATTCGTAGAACTGCAGACACAGAATTGGCTGTTGCAGATGCTATTAATATTGAAAAGGAGGTTGCTGACAGATCAAAAAGCAAGCTAGTTTATCTGAATCTTTGTTCACAAGAGCTACTGCATCGCACAAATAACACAAAATCCAACATAAACACAGACACGACTCTACCAACCTCATCATCACCAGTGCAAACTGATCAATCAGAACTAAATACTGATGATCTTTTGACTGACCCTGCAGTTCAAATAGCGTTGAAAAATGCTGGTTTGTTTTCTGATTCACCTCCAAGCAGTCCCCATAAGAACAATGAAATATGTAATGAAAAGGAAGTGTCAGGGCCTGATGATATACTTGAACTAGAATCTCATCCCGAGCTGGATATTTATGGTGATTTTGAGTATGATTTGGAAGATGATGATTACATAGGTGCCAGTGTTACAAAGATCCCAAACCTAAAAGAGCAAAGTGAATCAAAAGTGAAACTTGTTTTCTCCACCCCGAGCTTGAAAAAAACAAATAATGCTTTGGATAGTGCAGACTGTAAGGGGTCTGAAAACAATGAAGTGCCAGGAGTTGCCTCTTGCTCACCGAACTGTCACAGAGATGCAGTCCAGAAGGATTCTACCATTAATGCAGAGATTGGCCAGCCTTCCATTTCTTCTGGACTCCTACCATGTGAGGGTTCTGTTGAGCCAGTTGATTCAGAATTTGAAGATTTATACGGCCCTGATAAAGAACCACTTATAAAAAAGTTTCCAGATGGTGAATTACAATCATTACATGGAGAGGGCAAGATGGAAACTCAAAGCGAGAATAATGATTGCCATAAGGAAGAAGAACGTGACTTAGACAAAGCAGTAAATGGTGCTGAATTAGGGAATGAGAATCTCACAGAAAATGTGTCTGTCCCTATTATCACTGGCAAACCTCTTAATACATCCGGGACCGATGAAAATATTCAAAGGATGGAAGAGAGATCTGACATCCCTGCCAAGAAGTCAAACAATGAAAATCAAGTAGCGAAGAAGGTAGAAGCCTACATCAAGGAGCATATCAGGCCATTGTGCAAGAGTGGTGTGATCACGGCTGAACAGTACAGGTGGGCTGTTGCAAAAACAACTGAAAAGGTTATGAAGCATCATTGCAAATCAAAGAATGCTAATTTCCTCATAAAGGAAGGTGAGAAAGTAAAGAAACTCGCGGAGCAGTATGTTGAAACAGCCCAACAAAATAGAAAAAGTTGA 3816 0.4057 MESDFETNDMLTLSQNPFDDANDNDNLDVEGETCGICMDMVIDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVEDGSFFRDDDWSIDGKNNSLSFPSYYIDENAVTCLDGDGCKIRNGFASVEEDSGLDTSIACDSCDLWYHAFCVGFDTEGTSDSTWLCPRCVVDAVSKETDGNSIKEASLECNPDNNNSECHAGIVSVSIADAGETAVVVSMVDRNKWITETSERGLLPPEVDGDLLNEPCKLMSDTNNQLQATEKTNVSPIMKGEELELSLSHPTSKSFMHSDIKESDNGTRCEPSSFDGTKLFDESNAKTSPCKIESDMGLHLGLSVGSFLTVDNVDKSESKDQATDPPCSIPEEFPLEGDKLEINACDDSARVAGRKRKQLDYSHEQVRIKVEDEDANPELSVEASQKKTRIAASQVFRANDSVDAQLSGNAKKSPVLKHSPTKEIAASDIMNIVKGTNRRLSKGLADTNASKKLAEKKENMTGLRVKKIMKRVSDDGESSSLVQNLRKEIREAVRNKSSINFEENHFDKNLLEAFRAAITGPKTELVNKLSPSALKAKKSMLQKGKVRENLTRKIFGTSNGRRKRAWDRDCEIEFWKYRCMRASKPEKVETLKSVLDLLRKSSENPESERAPECQAKNPILSRLYIADTSVFPRKEDVKPFSEKTKQNNPSAKGPNQSVDNKTIKATEVNNLLSMTRVCLSEKKVDKIVRGPAGKVQLSSRSEGASVSSSAGAKVGTKESSLKSDSVKGDKRKWALEVLARKTAVASKNTANESQEDDAIFKGNYPLLAQLPTDMRPVLAPCRHNKIPVSVRQTQLYRLTERLLKNTNLPIIRRTADTELAVADAINIEKEVADRSKSKLVYLNLCSQELLHRTNNTKSNINTDTTLPTSSSPVQTDQSELNTDDLLTDPAVQIALKNAGLFSDSPPSSPHKNNEICNEKEVSGPDDILELESHPELDIYGDFEYDLEDDDYIGASVTKIPNLKEQSESKVKLVFSTPSLKKTNNALDSADCKGSENNEVPGVASCSPNCHRDAVQKDSTINAEIGQPSISSGLLPCEGSVEPVDSEFEDLYGPDKEPLIKKFPDGELQSLHGEGKMETQSENNDCHKEEERDLDKAVNGAELGNENLTENVSVPIITGKPLNTSGTDENIQRMEERSDIPAKKSNNENQVAKKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMKHHCKSKNANFLIKEGEKVKKLAEQYVETAQQNRKS 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 903 925 - -
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 745 766 - -
Mepo2g04739 1271 Pfam Ring finger domain 33 73 IPR001841 -
Mepo2g04739 1271 PANTHER RING FINGER PROTEIN 41, 151 115 1262 - -
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 690 709 - -
Mepo2g04739 1271 Coils Coil 529 549 - -
Mepo2g04739 1271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 94 IPR013083 -
Mepo2g04739 1271 ProSiteProfiles Zinc finger PHD-type profile. 66 186 IPR019787 -
Mepo2g04739 1271 SUPERFAMILY FYVE/PHD zinc finger 149 186 IPR011011 -
Mepo2g04739 1271 Pfam PHD-finger 148 184 IPR019787 -
Mepo2g04739 1271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 189 IPR013083 -
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 683 709 - -
Mepo2g04739 1271 SUPERFAMILY RING/U-box 33 79 - -
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 1113 1139 - -
Mepo2g04739 1271 ProSitePatterns Zinc finger RING-type signature. 50 59 IPR017907 -
Mepo2g04739 1271 SMART PHD_3 132 184 IPR001965 -
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 295 316 - -
Mepo2g04739 1271 ProSiteProfiles Zinc finger RING-type profile. 34 73 IPR001841 -
Mepo2g04739 1271 SMART ring_2 34 72 IPR001841 -
Mepo2g04739 1271 MobiDBLite consensus disorder prediction 741 770 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04739 34 85 C3H Transcription Factor Family AT3G58030 37.037 8.04e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo2g04739 PHD 7e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04739 - - gmx:100808102 1792.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04739 2 55659929 55670202 Mepo2g04739 2 55659929 55670202 ECH