Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04708 ATGGCCGACGTAGTTGCCGAGATCCCCACAAAGAAATCAAGAGGAAGCAGAAAGGCTCTCAAGGAGAAAGCTCCAACAGCCAATGATGCTAACATCATAGCTGGGGAGGCAGCTATTTCTCCCATTTCTGAGAATTTTACTAACCCTAAGAAGGGTAAAGCTGCATCAAAGAAACAACAAAAGCCAAAGGAAAGATCTTTCGAGCAAGATTTGCTCGAGATGCAGGAAAAGATGGAGCAGTTGCGCCTCGAGAAAGAGAAGACCGAAGAGCTGTTGAAAGCCAAAGATGAGATCTTGAAGCAAAAGGATGAAGAACTCGAGAATCGTGGCAAAGAGCTTAAGAAATTGCAGAAATTGAAAGAATTCAAACCCACCATGAATTTGCCTATGGTGAAAGACAAGGAACAAGAGAAGAAGGAAAAGAAAAAGAATGGGTGCCCTGAGAAGAAAAGGCCTTCTTCAGCATACATGTTATGGGTCAAAGATCAATGGCATGAGGTTAAGAAGGAAAATCCAGAGGCTGAATTTAAGGACATTTCAAACATTTTGGGGACTAAATGGAAGACAGTTAGTGAAGAAGAGAAGAAGCCTTATGAGGAGAAATACCAAGCTGAAAAAGAGGCTTATTTGCAAGTAATTACAAAGGAAAAACGTGAAATTGAGGCAATGAAACTCTTGGAAGAGGAACAGAAGCAGAAGACTGCTATGGAATTGCTTGAACAGTTTATGCAATTCAAACAAGAGGCAGAAAAGGAGAGCAAGAAGAACAAGAAAGAGAAGGATCCATTGAAACCCAAGCATCCTATGTCAGCTTTTTTCCTGTTTACTAATGATAGAAGAGCAGCTATTCTTGCAGACAACAAGGGTGTCTTGGAGGTTTCCAAGATCACATCTGAAGAGTGGAAAAACATGACAGAAGAACAAAAAAGGCCTTATGAAGAGATGGCAAAGAAGAACAGGGAGCAATATGCCCAAGAAATGGAGGCTTACAAACTGAAGAAAGATGAGGAGGCTGCAAATCTTATGAAGGAAGAGGAAGAACACATGAAACTTCAGAAACATGAAGCCTTGCAATTGCTCAAGAAGAAGGAAAAAACTGAAAACATGATCAAGGAAACAAAATTGAATCGTCAGAAGAAGAAACATAACAAGGAAGAAAATAATTCTGATCCAAACAGGCCTAAAAGACCTGCATCCTCATATATTCTTTTCAGCAAAGAAGCAAGGAAGAGAATACTGGAGGAACGTCCAGGAGTTGGAGGAAACATGCTCAACACACTTGTTTCAATGAAGTGGAAGGATATGAGTGAGGAAGATAAACAATTGTGGAATGGCAAAGCATCTGAAGCAATGGATGCATACAAGAAGGAAAGGGAGGAATACAACAAATCTATTGTTGCAAAGGTGGAGCAGAAAACCAATGAATGA 1428 0.4034 MADVVAEIPTKKSRGSRKALKEKAPTANDANIIAGEAAISPISENFTNPKKGKAASKKQQKPKERSFEQDLLEMQEKMEQLRLEKEKTEELLKAKDEILKQKDEELENRGKELKKLQKLKEFKPTMNLPMVKDKEQEKKEKKKNGCPEKKRPSSAYMLWVKDQWHEVKKENPEAEFKDISNILGTKWKTVSEEEKKPYEEKYQAEKEAYLQVITKEKREIEAMKLLEEEQKQKTAMELLEQFMQFKQEAEKESKKNKKEKDPLKPKHPMSAFFLFTNDRRAAILADNKGVLEVSKITSEEWKNMTEEQKRPYEEMAKKNREQYAQEMEAYKLKKDEEAANLMKEEEEHMKLQKHEALQLLKKKEKTENMIKETKLNRQKKKHNKEENNSDPNRPKRPASSYILFSKEARKRILEERPGVGGNMLNTLVSMKWKDMSEEDKQLWNGKASEAMDAYKKEREEYNKSIVAKVEQKTNE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04708 475 Gene3D High mobility group box domain 247 346 IPR036910 -
Mepo2g04708 475 Gene3D High mobility group box domain 371 474 IPR036910 -
Mepo2g04708 475 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 149 217 IPR009071 -
Mepo2g04708 475 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 1 471 IPR044601 GO:0003677
Mepo2g04708 475 MobiDBLite consensus disorder prediction 124 152 - -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 1 73 - -
Mepo2g04708 475 Coils Coil 313 354 - -
Mepo2g04708 475 SUPERFAMILY HMG-box 389 464 IPR036910 -
Mepo2g04708 475 Coils Coil 356 383 - -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 59 73 - -
Mepo2g04708 475 Coils Coil 444 471 - -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 359 401 - -
Mepo2g04708 475 SUPERFAMILY HMG-box 252 337 IPR036910 -
Mepo2g04708 475 Pfam HMG (high mobility group) box 265 331 IPR009071 -
Mepo2g04708 475 Pfam HMG (high mobility group) box 150 211 IPR009071 -
Mepo2g04708 475 Pfam HMG (high mobility group) box 394 462 IPR009071 -
Mepo2g04708 475 Coils Coil 213 233 - -
Mepo2g04708 475 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 265 331 IPR009071 -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 124 149 - -
Mepo2g04708 475 Gene3D High mobility group box domain 151 210 IPR036910 -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 246 267 - -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 359 392 - -
Mepo2g04708 475 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 394 462 IPR009071 -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 10 24 - -
Mepo2g04708 475 SUPERFAMILY HMG-box 138 211 IPR036910 -
Mepo2g04708 475 Coils Coil 235 255 - -
Mepo2g04708 475 Coils Coil 64 119 - -
Mepo2g04708 475 SMART hmgende2 264 332 IPR009071 -
Mepo2g04708 475 SMART hmgende2 148 218 IPR009071 -
Mepo2g04708 475 SMART hmgende2 393 463 IPR009071 -
Mepo2g04708 475 MobiDBLite consensus disorder prediction 246 266 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mepo2g04708 HMG_box 1.1e-14 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04708 K09273 - gmx:100783033 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04708 2 55420037 55422926 Mepo2g04708 2 55420037 55422926 ECH