Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g04698 | ATGTTTTATATTGCTGTCTCCAACAACATGCTTAAACAACCTTCTACACCTCCCATTTCCAACACCATCATCAAACACACTCATCACTTCACACAAACCAAACAAATCAACATCATGCCAAAAACTATACAAATAAGTTACACCGACCCTGACGCCACCGACTCTTCTTCCGACGAAGAAGAAAATCCAACACATTCCAATTTTACCCCTCGCCGCAGAATCAAAACGTTCATCCATGACATTATCATCGAAAAAGAAACCGTTTCAAATAAAAGAAAAAAACCTAACACCAGAGTTAAAACCAAAACTCCGGCGACTCAACGGCGGCCGGTGATTTACACCGGGAAGAAATACCGTGGAGTGAGACAGAGACCTTGGGGAAAATGGGCGGCGGAGATAAGAGACCCGAAACTGAAATTTCGACGGTGGTTGGGAACTTACAACACCGCTGAAGAAGCTGCTATGGAGTATGATAAAGCCGCCATTGAAATACGTGGTGCAGACGCGCTTACGAATTTCATTCAACCCACGACAAAGAAGGTTGTTATAAACTCCGGCGATGAATGCGTTGTTTCTGCCACGTCAGTACTTCATCATGATCAGTGTTGTACTTCTTCCTCAGAAGGAGGTGAATCCGTTACAGTAAAAGACAATGTTATTGTTCGGATGAGTACTGAATCTTTACGTGATTGTGAAAATGAATGTTCGTCTGTGTCGAGGAATTTGTTTGAGAATGATTCAGTAAAATCTGAGTCAGTTTTTCCAATTCCTAATAATACGTTTTTTGATGAGTTTGGGACAGGGTTGGAAAACATGTTCTTATTCCATGATGATTTGAGTGGAAGTTTTGTTGATACTTCAATTAATAGTTTGGATTTGGGTTTTACAGAATGGAACAGAGATTATGGTGATTTCCAGGATATAGGGGATTTGTTTGGTTCGGATCCTGTTACTGCTGCTGTTTTGTTTGATGAAGAAATGAGCCAAGTTTTGTAA | 996 | 0.4066 | MFYIAVSNNMLKQPSTPPISNTIIKHTHHFTQTKQINIMPKTIQISYTDPDATDSSSDEEENPTHSNFTPRRRIKTFIHDIIIEKETVSNKRKKPNTRVKTKTPATQRRPVIYTGKKYRGVRQRPWGKWAAEIRDPKLKFRRWLGTYNTAEEAAMEYDKAAIEIRGADALTNFIQPTTKKVVINSGDECVVSATSVLHHDQCCTSSSEGGESVTVKDNVIVRMSTESLRDCENECSSVSRNLFENDSVKSESVFPIPNNTFFDEFGTGLENMFLFHDDLSGSFVDTSINSLDLGFTEWNRDYGDFQDIGDLFGSDPVTAAVLFDEEMSQVL | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g04698 | 331 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 39 | 199 | - | - | |
Mepo2g04698 | 331 | FunFam | Ethylene-responsive transcription factor 2 | 116 | 175 | - | - | |
Mepo2g04698 | 331 | SMART | rav1_2 | 117 | 180 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo2g04698 | 331 | CDD | AP2 | 116 | 173 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo2g04698 | 331 | MobiDBLite | consensus disorder prediction | 47 | 71 | - | - | |
Mepo2g04698 | 331 | Pfam | AP2 domain | 117 | 166 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo2g04698 | 331 | PIRSF | PTI6 | 15 | 232 | IPR017392 | GO:0003700 | |
Mepo2g04698 | 331 | PIRSF | PTI6 | 206 | 327 | IPR017392 | GO:0003700 | |
Mepo2g04698 | 331 | PRINTS | Ethylene responsive element binding protein signature | 118 | 129 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo2g04698 | 331 | PRINTS | Ethylene responsive element binding protein signature | 140 | 156 | IPR001471 | GO:0003700|GO:0006355 | |
Mepo2g04698 | 331 | SUPERFAMILY | DNA-binding domain | 117 | 173 | IPR016177 | GO:0003677 | |
Mepo2g04698 | 331 | Gene3D | AP2/ERF domain | 116 | 175 | IPR036955 | GO:0003700|GO:0006355 | |
Mepo2g04698 | 331 | ProSiteProfiles | AP2/ERF domain profile. | 117 | 174 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g04698 | Mepo-Chr2 | 55350817 | 55351859 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g04698 | 24 | 319 | AP2-EREBP Transcription Factor Family | AT4G23750 | 36.676 | 3.04e-43 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Mepo2g04698 | AP2 | 2.1e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g04698 | - | - | tpra:123917311 | 334.339 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo5g00307 | 5 | 2706549 | 2707990 | Mepo2g04698 | 2 | 55350817 | 55351859 | PCT |