Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04698 ATGTTTTATATTGCTGTCTCCAACAACATGCTTAAACAACCTTCTACACCTCCCATTTCCAACACCATCATCAAACACACTCATCACTTCACACAAACCAAACAAATCAACATCATGCCAAAAACTATACAAATAAGTTACACCGACCCTGACGCCACCGACTCTTCTTCCGACGAAGAAGAAAATCCAACACATTCCAATTTTACCCCTCGCCGCAGAATCAAAACGTTCATCCATGACATTATCATCGAAAAAGAAACCGTTTCAAATAAAAGAAAAAAACCTAACACCAGAGTTAAAACCAAAACTCCGGCGACTCAACGGCGGCCGGTGATTTACACCGGGAAGAAATACCGTGGAGTGAGACAGAGACCTTGGGGAAAATGGGCGGCGGAGATAAGAGACCCGAAACTGAAATTTCGACGGTGGTTGGGAACTTACAACACCGCTGAAGAAGCTGCTATGGAGTATGATAAAGCCGCCATTGAAATACGTGGTGCAGACGCGCTTACGAATTTCATTCAACCCACGACAAAGAAGGTTGTTATAAACTCCGGCGATGAATGCGTTGTTTCTGCCACGTCAGTACTTCATCATGATCAGTGTTGTACTTCTTCCTCAGAAGGAGGTGAATCCGTTACAGTAAAAGACAATGTTATTGTTCGGATGAGTACTGAATCTTTACGTGATTGTGAAAATGAATGTTCGTCTGTGTCGAGGAATTTGTTTGAGAATGATTCAGTAAAATCTGAGTCAGTTTTTCCAATTCCTAATAATACGTTTTTTGATGAGTTTGGGACAGGGTTGGAAAACATGTTCTTATTCCATGATGATTTGAGTGGAAGTTTTGTTGATACTTCAATTAATAGTTTGGATTTGGGTTTTACAGAATGGAACAGAGATTATGGTGATTTCCAGGATATAGGGGATTTGTTTGGTTCGGATCCTGTTACTGCTGCTGTTTTGTTTGATGAAGAAATGAGCCAAGTTTTGTAA 996 0.4066 MFYIAVSNNMLKQPSTPPISNTIIKHTHHFTQTKQINIMPKTIQISYTDPDATDSSSDEEENPTHSNFTPRRRIKTFIHDIIIEKETVSNKRKKPNTRVKTKTPATQRRPVIYTGKKYRGVRQRPWGKWAAEIRDPKLKFRRWLGTYNTAEEAAMEYDKAAIEIRGADALTNFIQPTTKKVVINSGDECVVSATSVLHHDQCCTSSSEGGESVTVKDNVIVRMSTESLRDCENECSSVSRNLFENDSVKSESVFPIPNNTFFDEFGTGLENMFLFHDDLSGSFVDTSINSLDLGFTEWNRDYGDFQDIGDLFGSDPVTAAVLFDEEMSQVL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04698 331 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 39 199 - -
Mepo2g04698 331 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Mepo2g04698 331 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Mepo2g04698 331 CDD AP2 116 173 IPR001471 GO:0003700|GO:0006355
Mepo2g04698 331 MobiDBLite consensus disorder prediction 47 71 - -
Mepo2g04698 331 Pfam AP2 domain 117 166 IPR001471 GO:0003700|GO:0006355
Mepo2g04698 331 PIRSF PTI6 15 232 IPR017392 GO:0003700
Mepo2g04698 331 PIRSF PTI6 206 327 IPR017392 GO:0003700
Mepo2g04698 331 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Mepo2g04698 331 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Mepo2g04698 331 SUPERFAMILY DNA-binding domain 117 173 IPR016177 GO:0003677
Mepo2g04698 331 Gene3D AP2/ERF domain 116 175 IPR036955 GO:0003700|GO:0006355
Mepo2g04698 331 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04698 Mepo-Chr2 55350817 55351859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04698 24 319 AP2-EREBP Transcription Factor Family AT4G23750 36.676 3.04e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g04698 AP2 2.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04698 - - tpra:123917311 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00307 5 2706549 2707990 Mepo2g04698 2 55350817 55351859 PCT