Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04663 ATGGGTCAGCATTCTTGCTGCAATCAACAGAAGGTTAAGAGAGGTCTTTGGTCCCCTGAAGAAGATGAAAAACTCATCACTTACATTACCACTCATGGCTATGGCTGTTGGAGTGAAGTTCCTGACAAAGCTGGGCTTCAAAGATGTGGTAAGAGTTGTCGATTGAGATGGATAAATTATTTAAGACCTGATATTAGAAGAGGAAGGTTTACACCTGATGAGGAGAAGTTAATTATTAGCCTTCACAGTGTTGTTGGCAACAGATGGGCTCACATTGCAAGTCACTTACCTGGTAGAACAGACAATGAAATAAAGAATTACTGGAATTCTTGGATCAAAAAGAAAATAAGAAAGCATTCATCAAGCTCTAATTCAACCACCAATAATGTTACACAAAATGTTGTTCATCATTCCCACCTCAATTATAATTCTAATATAAAATTAGACCAGTTTGCCAACCAAGAGAATATAACAACAGCAAAACTACCAGAAACAACCTTGTTTTCTCCCACATGCCCTATGTTTATGTTTGAGCCTAGTGATTCACTTCATGGAACAACAACAGATACCAGTTGTAATCTGCAAACCGATCAATACTTCCAAGATTCTATAAATGGTTTGAGCTCTGAAACATGGAATCAAGTCCAGTCATCACTACCTCCTCCAATATCAACAACTTTTTCAATGGACACAATGAATTATCTACCACCTTTGATAGAGAATGTGGAAAACATGGATGAGGAGGGAGATCATAGAGGAGTACTAGAATGCTTGCAGGGTCACTGGGTAGAAGAAACACATCAACAATGTCCTAATAATTTTCATTTCTGGGACAATATTGTTCAAGGACATGGACTTGGTGGGGAAGAACAACTACCACCAAATTCATCAAATATGGGAACAAACAGCTTTCTGAAACTTGCAGGGATTCTTCTTTTCCTTTTGAGGATGATCTTTTTCAATTTTCTCTGTCCCTTTTGA 981 0.3792 MGQHSCCNQQKVKRGLWSPEEDEKLITYITTHGYGCWSEVPDKAGLQRCGKSCRLRWINYLRPDIRRGRFTPDEEKLIISLHSVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKHSSSSNSTTNNVTQNVVHHSHLNYNSNIKLDQFANQENITTAKLPETTLFSPTCPMFMFEPSDSLHGTTTDTSCNLQTDQYFQDSINGLSSETWNQVQSSLPPPISTTFSMDTMNYLPPLIENVENMDEEGDHRGVLECLQGHWVEETHQQCPNNFHFWDNIVQGHGLGGEEQLPPNSSNMGTNSFLKLAGILLFLLRMIFFNFLCPF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04663 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mepo2g04663 326 CDD SANT 69 112 IPR001005 -
Mepo2g04663 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo2g04663 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mepo2g04663 326 Gene3D - 68 140 - -
Mepo2g04663 326 FunFam MYB transcription factor 6 66 - -
Mepo2g04663 326 CDD SANT 17 61 IPR001005 -
Mepo2g04663 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo2g04663 326 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo2g04663 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo2g04663 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo2g04663 326 SMART sant 13 63 IPR001005 -
Mepo2g04663 326 SMART sant 66 114 IPR001005 -
Mepo2g04663 326 FunFam Transcription factor MYB26 68 138 - -
Mepo2g04663 326 Gene3D - 6 66 - -
Mepo2g04663 326 PANTHER MYB DOMAIN PROTEIN 55 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04663 Mepo-Chr2 54970711 54973146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04663 1 290 MYB Transcription Factor Family AT1G63910 47.091 3.20e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g04663 Myb_DNA-binding 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04663 K09422 K02947 gmx:100797787 388.652