Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04658 ATGGCTAGACAACTTTGTCATGAAGATGACAAAACATCAAGTGGTGGATTTTGTTACAACCCAACGATTCAAACACAAATCCAAGGTTTTGTGTCGGATCCAGAGATGTTCAATCTCACAACAGGGATGGAGATGATAGGTTTTACCAAACAACATCTTCAACAACATAGTACTGACACAACAAACTCTGTCATGTGGAAAACAAATTTCTCAGGAAAACTAAGTCAACAACATGTTGGTCCTTCCTCTTCTTCAAAAACCATGAATGAAAATTTCTATCATCACCAACAACAACATCAAGATTTCACTGTTTCTGATCCAACAAGTAGTGATCATAATCTAAACAACATGGTTCATCATCATCCTCATGATTCATCATCTTCACATCAGTGGCAACAAGTTGATGATTCATCTTTAAGATGTGTTTTCCCTTGTGAAGGTAATGAAAGACCAAGTCAAGGACTTTCACTCTCTCTTAGTTCAACAAACCCTTCCTCTATTGGTTTACAATCTTTTGAACTAAGACACACTACTAATCATCATTTACAAGATCAAGGGTATCAAGGTCATTTTCTTCTCAAAAACTCCAAGTACTTAGTTCCAGCACAAGAACTTCTCAATGAGTTTTGTAGTTTAGAGAGTACAAAGCAAAATGATTTAGTTTTACAAAAGCAAAAATCTCAAAAGTTCAACAACAAGCAAAGTTGGGAAGATGATAACAACAATGGTGGTAGCAGTTCTTCAATCAAACAATCTTTAACCTCTGTAGAGTTTGTTGAATTGCAGAAGAGAAAAACTAAGCTCCTTTCCATGCTAGAAGAGGTTGATAGAAGGTACAAGCACTATTGTAATCAAATGAGGAGTGTGGTTTCATCATTTGAAGCTGTAGCTGGAAATGGAGCAGCGAAAGTTTATTCAGCTTTGGCTTTAAAAGCTATGTCAAGACATTTTAGGTGTTTAAAAGATGGGATTTTAGAACAAATTCAAACAACAAGAAAAGCAATGGGAGAAAAAGACCCTGTTGCACCTGGAACAACAAAGGGTGAAACACCTAGGCTTAAAATACTTGACAGAGTTTTGAGACAACAAAGAGCATTTCAACAAATCAACATGATGGAAACACATCCTTGGAGACCTCAACGTGGTCTTCCTGAACGTTCTGTTTCAATTCTCAGGGCTTGGCTCTTTGAACACTTTCTTCATCCGTACCCAAGCGACGTTGATAAGCATATTTTGGCCCGCCAAACCGGTCTCTCAAGAAGCCAGGTATCAAATTGGTTTATTAATGCAAGAGTGAGACTATGGAAGCCAATGGTGGAGGAAATGTATTTGGAAGAAGAGAAAGAGCAACAAAGAAACACGACAACCTCGGACGGAGGAAACAATATTAATCATGAAGAGGATAATCTTAATGTACTTCAAAACCAATCTCAAACTCAACCTCATGAGGATCAAAAGCCACGACTCCTTCGAATCGATTCTGAATGTGTGTCATCTATCATCAACAACAATCATGATCATAAAAATGATGCTAATAATAAGAATTTGAATCATCACCAATTAGCCGCGGATGCATTTGGATCGGTTGATATTGATTTTTCATCTTATAATACGCATCATTCTTCTTCTGACATGGTTGCTGCTTACACAAGTGGTGAGAGTTTCCACCAAGGTGGCAGCAGTGGTGGAGTGTCATTGACGTTAGGGTTACAACAACATGGTGGAAATGGAGTGAGTTTGGCTTTCCCACCAACATCACAGAGTCCAATGTTCTATACAAGGGACCAAATTGAAGAACCGGTTCAGTACTCTCTTTTGGATGGTGAAGGAACAAATATTATGCCATACAGGAATCTCATGGGGACACAATTGCTACATGACTTGGCATAA 1890 0.382 MARQLCHEDDKTSSGGFCYNPTIQTQIQGFVSDPEMFNLTTGMEMIGFTKQHLQQHSTDTTNSVMWKTNFSGKLSQQHVGPSSSSKTMNENFYHHQQQHQDFTVSDPTSSDHNLNNMVHHHPHDSSSSHQWQQVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRHTTNHHLQDQGYQGHFLLKNSKYLVPAQELLNEFCSLESTKQNDLVLQKQKSQKFNNKQSWEDDNNNGGSSSSIKQSLTSVEFVELQKRKTKLLSMLEEVDRRYKHYCNQMRSVVSSFEAVAGNGAAKVYSALALKAMSRHFRCLKDGILEQIQTTRKAMGEKDPVAPGTTKGETPRLKILDRVLRQQRAFQQINMMETHPWRPQRGLPERSVSILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEQQRNTTTSDGGNNINHEEDNLNVLQNQSQTQPHEDQKPRLLRIDSECVSSIINNNHDHKNDANNKNLNHHQLAADAFGSVDIDFSSYNTHHSSSDMVAAYTSGESFHQGGSSGGVSLTLGLQQHGGNGVSLAFPPTSQSPMFYTRDQIEEPVQYSLLDGEGTNIMPYRNLMGTQLLHDLA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04658 629 Pfam Homeobox KN domain 394 433 IPR008422 GO:0003677|GO:0006355
Mepo2g04658 629 SUPERFAMILY Homeodomain-like 378 443 IPR009057 -
Mepo2g04658 629 SMART prehox3 187 326 IPR006563 -
Mepo2g04658 629 MobiDBLite consensus disorder prediction 102 130 - -
Mepo2g04658 629 ProSiteProfiles 'Homeobox' domain profile. 374 437 IPR001356 GO:0003677
Mepo2g04658 629 Pfam Associated with HOX 193 324 IPR006563 -
Mepo2g04658 629 CDD homeodomain 377 438 IPR001356 GO:0003677
Mepo2g04658 629 SMART HOX_1 377 441 IPR001356 GO:0003677
Mepo2g04658 629 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 107 466 - -
Mepo2g04658 629 FunFam BEL1-like homeodomain protein 4 380 442 - -
Mepo2g04658 629 Gene3D - 380 442 - -
Mepo2g04658 629 MobiDBLite consensus disorder prediction 446 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04658 Mepo-Chr2 54912104 54915659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04658 124 629 Homeobox Transcription Factor Family AT5G41410 46.903 2.82e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo2g04658 POX 7.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04658 - - tpra:123913365 980.319