Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04655 ATGGGATTTCCAGTAGGTTACACAGAACTTCTCTTCCCAAAATTAGTGCTTCACCTTCTCTCCATCTTCACTTTCATACGAAAGCTCATCAACACCATTTTCCGCTACATGGGTCTACCTGATTTCATCGAACCCGACATTATTTGGCCCGAGAATTCAACTCGAATACCCGAATTCGAATCCGTTTCGGCTCTTCTTATCCGTGAAATCCTTCCCGTTGTAAAATTCATGGAGCTGGTGGACCCACCCGAAAGCTGCGCTGTATGTCTTACTGAGTTCGAGGAAAACGATGAGATCAGACGGTTAGCGAATTGTAGACACATTTTCCATCGAGGATGTTTGGACCGTTGGATGGGATATGATCAGAGAACGTGTCCTTTGTGTAGAACACCTTTTATACCTGATGAGTTGCAAAGTGCTTTCAATGAGAGATTATGGGCTGCTTCTGGGATCCCTGAATTTCATTCTGCTGATGATGTTCTTTCTTTGTAG 492 0.439 MGFPVGYTELLFPKLVLHLLSIFTFIRKLINTIFRYMGLPDFIEPDIIWPENSTRIPEFESVSALLIREILPVVKFMELVDPPESCAVCLTEFEENDEIRRLANCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPDELQSAFNERLWAASGIPEFHSADDVLSL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04655 163 SMART ring_2 86 128 IPR001841 -
Mepo2g04655 163 SMART ringv_2 85 129 IPR011016 GO:0008270
Mepo2g04655 163 SUPERFAMILY RING/U-box 71 135 - -
Mepo2g04655 163 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Mepo2g04655 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 132 IPR013083 -
Mepo2g04655 163 CDD RING-H2_RHA1-like 86 132 - -
Mepo2g04655 163 Pfam Ring finger domain 85 129 IPR001841 -
Mepo2g04655 163 PANTHER RING ZINC FINGER PROTEIN-RELATED 22 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04655 Mepo-Chr2 54873839 54874678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04655 1 150 C3H Transcription Factor Family AT1G63840 59.355 7.87e-61 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04655 K16281 - rcu:8287413 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00336 5 2936938 2938003 Mepo2g04655 2 54873839 54874678 PCT