Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04648 ATGGGCGGTTGTTGCTGTTGTGCTTCCAAAGAGACTGTATTGAGCGCTGCTGCACCTGCTTACTATTATCAGTACCCAAGAGCATCAGAGGAGCATGTTCCACTATCTTCTCAACCGGGTGCTCCCTCTGGTGGAAGGCTCTTGGTTGATACTAATCTAGATACTTCAAGTCCTGATACTTATAGACCACCTCCTGCTCCTCTCCCTTTCAATTTGACATCAGGAGCCACTCAGATTGCACCTGTGACTCAAGAGATTTCCTGTGACAAGAACGACACATCCTCACTTTCTACAAATTCTAATTCAGTTCAAGAACCATCTGGAGACAATCACAGAACCTCACCTAAGTCGGAAGAACCGAAGGAATCAGAATGCAAAGGTCAGACTGATATAGAACAGGACACAGCAAAGGATTCTGAAATTGAACTTTCAAAGTTGGGAGAACCTATAGATTTAGTAGAAGAGGATACATGCCCGATATGTTTAGAAGAATATGATGCTGAAAATCCAAAACTCACCACTCAATGTGGCCATGACTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGCCCTGTTTGTGATCAGGTTTCTCCCACTCATTCCCTATTTCCCATTTTATCTTTAGATATTTGTAAAGATATCATTACCAATGAGATATTTATAAATCCGTATTTCTTCGGTGCAGGTTACAGTTTTCAGCACTCCCATTGA 726 0.4201 MGGCCCCASKETVLSAAAPAYYYQYPRASEEHVPLSSQPGAPSGGRLLVDTNLDTSSPDTYRPPPAPLPFNLTSGATQIAPVTQEISCDKNDTSSLSTNSNSVQEPSGDNHRTSPKSEEPKESECKGQTDIEQDTAKDSEIELSKLGEPIDLVEEDTCPICLEEYDAENPKLTTQCGHDFHLACILEWMERSETCPVCDQVSPTHSLFPILSLDICKDIITNEIFINPYFFGAGYSFQHSH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04648 241 MobiDBLite consensus disorder prediction 89 110 - -
Mepo2g04648 241 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
Mepo2g04648 241 Pfam Ring finger domain 156 198 IPR001841 -
Mepo2g04648 241 SMART ring_2 158 198 IPR001841 -
Mepo2g04648 241 MobiDBLite consensus disorder prediction 89 140 - -
Mepo2g04648 241 MobiDBLite consensus disorder prediction 111 140 - -
Mepo2g04648 241 SUPERFAMILY RING/U-box 148 204 - -
Mepo2g04648 241 CDD RING-H2_AIRP1-like 154 201 - -
Mepo2g04648 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 205 IPR013083 -
Mepo2g04648 241 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 45 202 - -
Mepo2g04648 241 MobiDBLite consensus disorder prediction 32 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04648 Mepo-Chr2 54792868 54795880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04648 1 200 C3H Transcription Factor Family AT5G41350 50.244 2.08e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04648 - - vra:106765380 298.516