Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04645 ATGGAAAACGGGTCTTCCCTTGATCGCCTTGAAACTGAAACTTTTACTAAATTTCATGCAAACGGCGATTGTCTTGTCGAGGATCGTGTTGATAGTGCTGATCCTCACAGATCTAGACAAAAATCTTTGTTTTATCAAATTTTTTCAGTTTACCAAGAGGAGAATTGTATTAGAGGCAATGTGAGACCTGTGCCGGTGATGCTCGGTGACAGTCAATTGCTTGATTTATACCAACTTTTCTCCCTTGTGAAAGAAAAAGGAGGGTATGCTGCAGTATTGAGAAAAGGGTTGTGGGACTCTGTGATAGTTGATCTGGGTTGGCTCAGCAAAACTTTCAAAGAGAAGAGTTTCAAAAATTGGAATGATGGGTGTTTGAATTCATTGCCAATAGATCTAGAAGAAGAGTTCCAAAGCCTTTTATGCTCAAATCTAAAGGACAAAGATTATCATTTTGTCACGTTAGAGCCCAGTAACATCATTAAGCACATTGATTTGGTTAACCACAAGAGTGATGGTAATTTATTGGACACTAAAAACCAAAACAACAAATGTGAGGGTGTCCAAAATTTTAACGGTGATGGTAATGAGGATGACAATGAAAAATTCGGCACTGGTGTCAAGGATGATCTAGCCGCCTCTTTTGAATTTCATTCTCGCAAACGTAAAAGGGAATCATTATCGGAAATGATAGACTGGACGAAGAATATCGCAATACATCCGTTTGATCCTGAGGAGTATAAAGGAGGCCAGGACTCTTGTTCTGATGCTGAAGGCAAGAGATGTTCTGTCGGTCAGAAAGCATGCAGAACCAAACAGTGGGCCATCATCAAAGGTATAATTTCAATGCACATGATGACTGTATACATGATTTTACACATTGGATTTTTTGTGTGTTCATATCCTGAACCAGAATGTTTTCACATGAACGGCTAG 933 0.3923 MENGSSLDRLETETFTKFHANGDCLVEDRVDSADPHRSRQKSLFYQIFSVYQEENCIRGNVRPVPVMLGDSQLLDLYQLFSLVKEKGGYAAVLRKGLWDSVIVDLGWLSKTFKEKSFKNWNDGCLNSLPIDLEEEFQSLLCSNLKDKDYHFVTLEPSNIIKHIDLVNHKSDGNLLDTKNQNNKCEGVQNFNGDGNEDDNEKFGTGVKDDLAASFEFHSRKRKRESLSEMIDWTKNIAIHPFDPEEYKGGQDSCSDAEGKRCSVGQKACRTKQWAIIKGIISMHMMTVYMILHIGFFVCSYPEPECFHMNG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04645 310 SMART bright_3 39 126 IPR001606 GO:0003677
Mepo2g04645 310 SUPERFAMILY ARID-like 40 107 IPR036431 GO:0003677
Mepo2g04645 310 Gene3D - 26 125 IPR036431 GO:0003677
Mepo2g04645 310 CDD ARID 44 106 - -
Mepo2g04645 310 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 36 253 - -
Mepo2g04645 310 Pfam ARID/BRIGHT DNA binding domain 57 108 IPR001606 GO:0003677
Mepo2g04645 310 ProSiteProfiles ARID domain profile. 38 148 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04645 Mepo-Chr2 54744349 54745348 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mepo2g04645 ARID 6.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04645 - - mtr:25484375 318.161