Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04628 ATGTTGTCCGAGTTCAAGATAATGGTGCCACAAAACATGAAGGAACAACTTGCTTTGGCAGTTAGAAGCATTCAATGGAGCTATGTAATATTCTGGTCTGAATCTGTTCACCAACCAGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGAGATTAAGACAAGGAAAACAAGTCAGGGAGTGGAACTTAGTTCCGACGAAATAGGCTTACAGAGGAGTGAGCAGCTGAGAGAGCTTTTCAGGTCCCTCAGAACTGTAGATACCAATCCTCAAACAAAAAGGCCTTCTGCAGCACTTTCACCTGATGATCTCACAGATACTGAGTGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGTTTACCAGGAAGAGCTCAAGAAAATGACCAACCAATTTGGCTGATTGATGCTGATTCTGTTGATTGCAAAGAGTTTAGTCGCGCTCTCCTCGCAAAGGTATATGTTTCTACAGTGGTGTGTTTTCCTTTTATGAAAGGGGTCATTGAGCTAGGCACAACTGATCACGTATTGGAAGATGTCAGTCTCATTCAACAGATCAAAACTTCTTTACTGAATAGTCTAAGTGTCGATGACCCTATTAACGCTCGAGCTACATTGAGTTCGAGAAATAACGAAGGTGTTGCTTGTGTAGCATTTGATGATAATGATTATGATGTTGAATTAATTCCAGAAGTTGGACATGACATAATCAACACAACAACCTCTCCTAATGGTAGCTCAAATGCATTACAAGCCAATCAACTACCAAATGAAACATTCATGGTTGAAAGCTGGCAAGTTTTGGAAGATGATTTGAGCAACTGTATTCATAACTCCGTGAATTCAAGTGACTGCATATCACAAAATATTTCTTCTGCTCCTAATGTTGGAGAAGATTGCATTAATAACCAAAAAATGAGCTTAGTGGATCCTCTAAGTGAAGATTGGCATTATCAGAAGATTCTTTCAGAACTTTTAAAAAGCAATGACCAGTTAACAATGGGGATGCATTTTCAAAACTTTCATCAAGAATCAAGCTTTTGTGCTTGGAACAAAGGTGTGCCAGTGAATTTCCAAAGGCCAAGACAAGGGACCTCACAAAAGTTATTGAAGAAGATTTTGTTCGAAGTTCCACGGATGCACACTGATGGTTTGCTTGAATCTCAAGAGGAGAATGACTATAGAGAAGGTTCAAGACTAGAGGCTGATGAAGGTATGAACCATGTTTTGTCAGAAAGAAGGAGAAGAGCAAAGCTAAATGAAAGGTTTTTAACTCTTAGATCAATGGTTCCTTCAAATAGTAAGGATGACAAAGTTTCCATACTAGATGATGCAATTGAATACCTTAGAAAGCTTGAGAAAAAGATAAGAGAATTGGAAACTCAAAGAGAGCCAGCAGGTATAGAGTCTAGAAGTAAAAAATCACATCATGATATGGTGGAGAGGACTTCAGATCATTACTATAATAGCAAAACTAACAATGGGAAGAAACCTATGGTGAAAAAGAGGAAAATTTGTGACATAGAGGAGACAAGGAGAGAGATATGTTCAGATGCTTCAAAAGGAAGTTCTAATAGGAATGTTACTGTCAGTATGAGTGACAATGGAGTTGTAATTGAAATGAAGTGCCCTTCTAAAGCAGGAAGGATATTGGAAATTATGGAAGCAGTTAACAATCTCAATATAGATTTTAATTCAGTTCAATCAACAGAAGAAGCTGATGGGAGTCTTCATCTAATCATTAAATCGAAGTTCAAAGGACCAGCTAATGCAACAACAAAAAGGATCAAGCAAGCCCTCCAAAAAGTGGCTTCAAAGTTTTGA 1839 0.3839 MLSEFKIMVPQNMKEQLALAVRSIQWSYVIFWSESVHQPGVLSWGEGYYNGEIKTRKTSQGVELSSDEIGLQRSEQLRELFRSLRTVDTNPQTKRPSAALSPDDLTDTEWYYLVCMSFVFNIGQGLPGRAQENDQPIWLIDADSVDCKEFSRALLAKVYVSTVVCFPFMKGVIELGTTDHVLEDVSLIQQIKTSLLNSLSVDDPINARATLSSRNNEGVACVAFDDNDYDVELIPEVGHDIINTTTSPNGSSNALQANQLPNETFMVESWQVLEDDLSNCIHNSVNSSDCISQNISSAPNVGEDCINNQKMSLVDPLSEDWHYQKILSELLKSNDQLTMGMHFQNFHQESSFCAWNKGVPVNFQRPRQGTSQKLLKKILFEVPRMHTDGLLESQEENDYREGSRLEADEGMNHVLSERRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKKIRELETQREPAGIESRSKKSHHDMVERTSDHYYNSKTNNGKKPMVKKRKICDIEETRREICSDASKGSSNRNVTVSMSDNGVVIEMKCPSKAGRILEIMEAVNNLNIDFNSVQSTEEADGSLHLIIKSKFKGPANATTKRIKQALQKVASKF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04628 612 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 408 457 IPR011598 GO:0046983
Mepo2g04628 612 PANTHER TRANSCRIPTION FACTOR TT8 9 610 - -
Mepo2g04628 612 Pfam Helix-loop-helix DNA-binding domain 412 458 IPR011598 GO:0046983
Mepo2g04628 612 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 193 IPR025610 -
Mepo2g04628 612 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 411 474 IPR036638 GO:0046983
Mepo2g04628 612 Coils Coil 447 474 - -
Mepo2g04628 612 SMART finulus 414 463 IPR011598 GO:0046983
Mepo2g04628 612 Gene3D - 409 474 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04628 Mepo-Chr2 54595803 54601383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04628 9 609 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 43.243 6.68e-156 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g04628 bHLH-MYC_N 2e-44 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04628 - - mtr:25502049 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04628 2 54595803 54601383 Mepo2g04628 2 54595803 54601383 ECH