Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04614 ATGGGTTGTAATTTCTCAAAGTACTCAACATGCTGTTGTAGTACTGATCAAGGTGGTGTTCAGGTTCCTGAGGCAAACATTGAGGAAAATGAAGACAATAATGTTGAGGGAAATGGCTTGGCGTCATTTCGTGAATATACAATTGACCAGCTTAGGAAGGCTACCTCCGGATTTGCAATTGAAAATATAGTTTCTGAGCATGGTGAAAAGGCTCCAAATGTTGTTTATAAAGGGAAACTTGAAAATCAAGTGCGAATTGCAGTCAAACGGTTCAACAAGTCTGCCTGGCCAGATGCCCATCAATTTTTGGAAGAGGCCAGAGCTGTTGGCCAGCTAAGGAGCCAAAGATTGGTAAATCTGCTTGGATGTTGCTGTGAAGGTGATGAAAGGTTGCTTGTATCAGAATATATGTCCAATGATACTTTGGCAAAGCACTTGTTCCATTGGGAAACTCAGCCCATGAAGTGGGCAATGCGGCTTAGAGTTGCTTTATACCTTGCCCAAGCTCTGGAGTACTGTACCAGCAAAGGACGTGCTCTGTACCATGATCTAAATGCTTACAGAGTTCTTTTTGATGATGACTTCAATCCTAAACTTTCATGCTTCGGTTTGATGAAAAACAGTCGAGATGGAAAAAGTTATAGTACGAATTTGGCATTTACACCACCAGAGTATCTCAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTACAGCTTTGGGACCCTTTTGCTCGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCCCTTGACCTGATCAGGGACAGGAACCTTCAGAGTCTAACAGACTCATGTTTAGAAGGACAATTTTCAGATGACGAGGGGACTGAATTGGTTCGTCTAGCCTCACGATGTTTACAATCTGAACCGAGAGAGCGTCCTAATCCGAAGTCACTGGTCACTGCTCTAATACCTTTGCAGAAAGATTCTGAGGTTCCTTCTCATGTGCTGATGGGCATACCTGATGGTAGTGCTGCCTTTCCCCTTACTCCACTCGGAGAAGCTTGTCTACGCAGGGATCTGACTTCCATACATGAGGTGCTGGAGAAAATTGGGTATAAAGATGATGAGGGGGCAGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGCAAACAATAGACTCGAAGAAGAAGGGCGATTCTGCTTTTCGAATGAAGGACTTTAAAACTGCAATTGAGGGCTATACACAGTTTATTGAAGTTGGAAGCATGGTTTCTCCAACAATTTATGCACGTCGTAGTCTGTCTTATCTCATCAACAATATGCCAAACGAAGCACTTGGTGATGCAATGCAGGCGCAAATGATATCTCCTGTTTGGTACATTGCATTTTATTTACAAGCTGTTGCCCTTTTGGCTCTTGGCAAGGAGAATGATGCCCAAGTGGCACTTAAAGAGGGTTCTTCACTTGAAGCTAAAAATAGCACAAATTAG 1470 0.434 MGCNFSKYSTCCCSTDQGGVQVPEANIEENEDNNVEGNGLASFREYTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGKLENQVRIAVKRFNKSAWPDAHQFLEEARAVGQLRSQRLVNLLGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDDFNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQSLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGSAAFPLTPLGEACLRRDLTSIHEVLEKIGYKDDEGAATELSFQMWTNQMQQTIDSKKKGDSAFRMKDFKTAIEGYTQFIEVGSMVSPTIYARRSLSYLINNMPNEALGDAMQAQMISPVWYIAFYLQAVALLALGKENDAQVALKEGSSLEAKNSTN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04614 489 Gene3D Tetratricopeptide repeat domain 381 489 IPR011990 GO:0005515
Mepo2g04614 489 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Mepo2g04614 489 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04614 489 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Mepo2g04614 489 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Mepo2g04614 489 FunFam probable serine/threonine-protein kinase At5g41260 138 329 - -
Mepo2g04614 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 26 487 IPR045845 GO:0004672|GO:0009742
Mepo2g04614 489 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
Mepo2g04614 489 FunFam probable serine/threonine-protein kinase At4g35230 382 489 - -
Mepo2g04614 489 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Mepo2g04614 489 SUPERFAMILY TPR-like 388 486 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04614 Mepo-Chr2 54505537 54511552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04614 22 337 Glycoside Hydrolase AT3G07070 34.870 1.27e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mepo2g04614 PK_Tyr_Ser-Thr 6.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04614 K14500 - gmx:100797107 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04614 2 54505537 54511552 Mepo2g04614 2 54505537 54511552 ECH