Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04610 ATGGATGGGAGAGAGGCTATGGCATTTTCTGGTGGCCCTGGTTCATATTACATGCATAGAGGAGGGTCTGGTTCTGGAGGGTTCCAATTACCCCCTCCTGGATTCAGACCTTTGCCAAACACTGGCATTATAGCTCAGCCAAATGCTAGGGGTCAGGGTGGTAATGTTGACACTAGTTCCATGTTTTCATTGGAGACTCAGTCTCATAATTCTCATGCCAATTTTAATCATGGCATTAGCATTGGTGCATCTTCTGGGGCACCTTCTAGTGACCCTGTGAAAAAGAAAAGAGGGAGACCCCGAAAATATGGTCCGGATGGTTCGGTTTCTTTGAAACTTTCTCCAACGTCTGCCCCTGCTAAATCCACTCAGGATTCAACTACACCTTCTGAGAAACGGGGTAGAGGCCGCCCTCGTGGATCTGGAAGGAAGCAACAGCTAGCTGCATTAGGTGACTGGATGACCAGTTCAGCAGGGTTGGCTTTTTCGCCTCATGTTATCACCATTGGAGTTGGCGAGGACATTGCAGCAAAGCTATTGGCGTTATCACAGCAGAGACCAAGGGCTCTTTGCATCTTGTCGGGCAATGGGATAGTTACTTCAGTTACTCTGCGACAACCTGCCTCTACAAACATAGGTGTAACTTATGAGGGAAAATTCCAAATATTGAGCTTGTCTGGTTCTTACTTGGTTGCTGAAGAAGGTGGACCATCCAATAGAACAGGGGGCATAAGTGTTTCTCTTTCTAGTCGTGATGGTCATGTTATTGGTGGCAGTGTTGCTAAGCTTATTGCCGGAAGCCCAATACAGGTGGTTGTATGCAGTTTTGTATATGGTGGTGGCTCGAAGGTTAAGACTAAACAAGAAACTGCTGCCAACGGTGAAAGTTCTGAGCCTCATAACGATGATAAGCTAGCTTCTCCAGCCAGTGCTCCACCTGGTCAAAACTATGTCTCTTCTCCTACAGGCATGTGGCCCGGATCACAGCCATCTGACGTGAAAAGCGTGCACGCACATACTGGCTTTGACTTGACAAGAGGATGA 1044 0.4751 MDGREAMAFSGGPGSYYMHRGGSGSGGFQLPPPGFRPLPNTGIIAQPNARGQGGNVDTSSMFSLETQSHNSHANFNHGISIGASSGAPSSDPVKKKRGRPRKYGPDGSVSLKLSPTSAPAKSTQDSTTPSEKRGRGRPRGSGRKQQLAALGDWMTSSAGLAFSPHVITIGVGEDIAAKLLALSQQRPRALCILSGNGIVTSVTLRQPASTNIGVTYEGKFQILSLSGSYLVAEEGGPSNRTGGISVSLSSRDGHVIGGSVAKLIAGSPIQVVVCSFVYGGGSKVKTKQETAANGESSEPHNDDKLASPASAPPGQNYVSSPTGMWPGSQPSDVKSVHAHTGFDLTRG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04610 347 Gene3D - 164 293 - -
Mepo2g04610 347 MobiDBLite consensus disorder prediction 71 87 - -
Mepo2g04610 347 CDD DUF296 164 276 IPR005175 -
Mepo2g04610 347 ProSiteProfiles PPC domain profile profile. 156 298 IPR005175 -
Mepo2g04610 347 MobiDBLite consensus disorder prediction 312 335 - -
Mepo2g04610 347 MobiDBLite consensus disorder prediction 110 127 - -
Mepo2g04610 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 277 IPR005175 -
Mepo2g04610 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 281 - -
Mepo2g04610 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 66 313 IPR039605 GO:0003680
Mepo2g04610 347 MobiDBLite consensus disorder prediction 71 147 - -
Mepo2g04610 347 MobiDBLite consensus disorder prediction 288 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04610 Mepo-Chr2 54473613 54477446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04610 1 347 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 47.165 6.07e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04610 - - gmx:100813888 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04610 2 54473613 54477446 Mepo2g04610 2 54473613 54477446 ECH
Mepo5g00348 5 3054277 3057964 Mepo2g04610 2 54473613 54477446 PCT