Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04597 ATGAAGTTGTGTACTTCATTGTTGTTTCTGGGTTTGCTTTCTATGCTTTCCTTTGTGGCTTATGCTATGGTGGCATCAAATGAAGTTGGGGCACTTACAACCTTCAAAGAAGCTGTTTATGAAGATCCACATATGGTTTTGTCAAATTGGAATACTTTGGATTCAGATCCTTGTGACTGGAATGGAGTTTCATGCACCGGAACTCGAGATCATGTCATCAAGCTAAACATATCAGGGGCATTACTAAGAGGGTTTCTTGCTCCAGAAATCGGGAAAATAACCTACTTGCAAGAACTAATATTGCATGGCAACAATCTCATTGGAACAATACCGAAAGAATTGAGCGCGTTAAAATCTCTTAAGGTGTTGGATTTGGGAAAGAATCAGTTATCTGGACCAATTCCTCGAGAGATTGGAAATTTGACACAAGTTGTAAAAATAAATCTCCAGTCCAATGGTTTGACTGGTAGGTTGCCTTCAGAGCTTGCAAATTTGAAATATCTTCAAGAACTTCGGCTCGATAGGAATAAGCTTGAAGGACCTGTTCCTGCTGCTAGCACTTCAAATTTTCCTTCAAATATGCATGAATTGTATGCCTCAAATGCGAATTCGACCGGCTTCTGTCGTTCGTCGCTTAAAGTTGCAGATTTTTCATATAACTTTTTGGTTGGTAGCATACCAAAATGCTTAGAGTATCTTCCAAGAACTAGCTTTCAAGGGAATTGCCTCCGTGTCAAAGTTGTAAAACAGCGGACTAAAGTTCAATGTGCTGGAGCTTCACCTGCTCAAGGTCACCCAGTAGTGAAACCAAAACACCTGTCTAAAGCTGAACATGAATCAAAGCATGAAGGAGGTTCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGCAACCGGAACCATGGTTGGTTTTCTCTTTCTGATTGGTATTTTCACTGCTATCCAAAGGTTTAACAACAAATCATCCATCATTATTCCTTGGAAGAAATCCTCAAGCGAGAAAGAGCAAATCTCTGTATATATAGATTCTGAGATGTTGAAAGATGTGACGAGGTATAGCAGACAAGAGCTTGAGGTGGCTTGTGAAGACTTCAGTAACATAATTGGATCTTCACCGGATAGTGTGGTCTACAAAGGTACAATGAAAGGTGGACCTGAGATTGCTGCAATTTCCCTCTGCATTAAGGAAGAGAATTGGACTGGACACCTTGAACTTTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGATAAATCATGAGAATACAGGAAAGCTACTAGGCTATTGCAGAGAGAACAGTCCATTTACAAGGATGCTGGTTTTTGATTATGCATCAAATGGCACACTTTATGAGCACCTACATTGTTATGAAGAAGGGTTCCGGCTATCTTGGACGCGGCGCATGAAAATTATCATAGGCATTGCGCGGGGACTTAAGTATTTGCACAATGAAATTGAACCTCCTTTTACTATATCAGAGTTGAATTCAAATGCTATATACCTTACAGAAGATTTTTCCCCCAAGTTGGTTGATTTTGAAAGTTGGAAGACGATTCTTGAAAGATCAGAAAAAAATTCTGGTTCTGTTAGCAGCCAAGGTGCTGTTCCAAACTCCCTTCAAGCCCGCCATCTTGATACCGAAGGAAACATTTATGCTTTTGCAGTACTTCTACTTGAGATTATCAGTGGGAGATCTCCATACTGCAAGGACAAAGGTTACTTGGTGGATTGGGCCAGGGATTACCTTGAATTGCCAGAAGTAATGTCATATTTAGTGGATCCTGAGTTGAAACATTTCGGATATGATGAGCTCAAAGTAATATGTGAGGTGGTAACACTTTGTATTAGTCCTGACTCCAATGGCTGTCCATCAATGCAAGAGTTGTGCAACATGCTGGAAAGCAGAATCGACACATCGATAAGTGTGGAGCTCAAGTCATCATCTTTAGCTTGGGCTGAACTAGCACTTTCATCATAA 1977 0.4057 MKLCTSLLFLGLLSMLSFVAYAMVASNEVGALTTFKEAVYEDPHMVLSNWNTLDSDPCDWNGVSCTGTRDHVIKLNISGALLRGFLAPEIGKITYLQELILHGNNLIGTIPKELSALKSLKVLDLGKNQLSGPIPREIGNLTQVVKINLQSNGLTGRLPSELANLKYLQELRLDRNKLEGPVPAASTSNFPSNMHELYASNANSTGFCRSSLKVADFSYNFLVGSIPKCLEYLPRTSFQGNCLRVKVVKQRTKVQCAGASPAQGHPVVKPKHLSKAEHESKHEGGSKPAWLLALEIATGTMVGFLFLIGIFTAIQRFNNKSSIIIPWKKSSSEKEQISVYIDSEMLKDVTRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAAISLCIKEENWTGHLELYFQREVADLARINHENTGKLLGYCRENSPFTRMLVFDYASNGTLYEHLHCYEEGFRLSWTRRMKIIIGIARGLKYLHNEIEPPFTISELNSNAIYLTEDFSPKLVDFESWKTILERSEKNSGSVSSQGAVPNSLQARHLDTEGNIYAFAVLLLEIISGRSPYCKDKGYLVDWARDYLELPEVMSYLVDPELKHFGYDELKVICEVVTLCISPDSNGCPSMQELCNMLESRIDTSISVELKSSSLAWAELALSS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04597 658 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mepo2g04597 658 SUPERFAMILY L domain-like 31 234 - -
Mepo2g04597 658 SUPERFAMILY Protein kinase-like (PK-like) 339 633 IPR011009 -
Mepo2g04597 658 ProSiteProfiles Protein kinase domain profile. 362 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04597 658 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Mepo2g04597 658 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Mepo2g04597 658 Gene3D Ribonuclease Inhibitor 24 253 IPR032675 -
Mepo2g04597 658 Pfam Protein tyrosine and serine/threonine kinase 365 569 IPR001245 GO:0004672|GO:0006468
Mepo2g04597 658 Gene3D Transferase(Phosphotransferase) domain 1 444 648 - -
Mepo2g04597 658 MobiDBLite consensus disorder prediction 258 283 - -
Mepo2g04597 658 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Mepo2g04597 658 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
Mepo2g04597 658 PANTHER PROTEIN MALE DISCOVERER 2 16 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04597 Mepo-Chr2 54408136 54412342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04597 1 638 Receptor kinase-like Gene Family AT2G35620 28.528 1.62e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mepo2g04597 PK_Tyr_Ser-Thr 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04597 - - gmx:100781978 1047.73