Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04588 ATGTGGGGATGGATGATAAGGGAAGGCCGGAAGGCATCGTCAATGTCACTGACAGCCTGGAACCTAACCCTCCTCCGTAACATGGGCGGCGGTCCTCGCACCTTCCCCGGCGGCGTAAGCAAATGGAAATGGAAACGTATGCACGAAAAACGCGCCAAAGAGAAACAGAGAAACCTTCTCGAACAAGAGAAACAACTCTACCAAGCTCGCATTCGATCTCATATTCGCTCCACTCTCTCACCTTCTTCATATTCATCTTCCTCCACCACTCATAACCCTATTTCCCCCTATCAACACATCAAAGCCCTCGCCGATCGTTTCATGAAAGACGGTGCTCTAGATCTCTGGAACGACCTCGATGGCCCACAAACCCAACCCCAGACCCAGATTCAATCCCAAGCATCGCCTCAAATTGATTTTCCCAATCGGAATTTGAATAATTATTCACAAATTAGGGGCTACCGTTCTGTTCCTGAGGTTAGGGATTTGAGTGATCGGAAGAAGGTTGGGATGGAAAAGCCTGAAAGGCGAAGAATTTGGAGAAAGAATGATTCTTCCAGTGATAGTGGGAGTGAGGATGAAGTGGACTCAAAGAATGAGGGGTACTATTCTAAGGTGGGTAGTATTGCTGCATTGGGGAAATATGATGTGAAGAGGGTGAGGAGAATGAAGCCCAAGGATTTTGATGATGAAACTGATTTTTCGGAGCAGATTGAGTTGATTAAGAATGAGCTTAAGAATAAGAAGTTGAGTCGCCATGAGGAGGAAAATCAGGGTCAGGAACTTGAAAATGTTCTTAGTCAGACAAGATTTGACGAGTGCGCTATATCACCATTGACAATCAAAGCACTTTCTACATCTGGTTACACTCATATGACCCGGGTTCAAGAGACTAGCCTCCCTATTTGTCTTGAGGGTAATGATGTTATGGTCAAGGCTAAAACTGGCACTGGAAAAACTGCAGCTTTTTTGCTTCCTGCTATTGAAACAGTTTTGAAAGCTATGAGCAGCAAGACCTCTCATCGTGCACCACCAATATTTGTTCTTATTCTATGCCCTACCAGAGAACTTGCTAGTCAAATTGCTGCTGAAGCAAAGGTTTTGCTTAAATATCACGATGGTGTAGGGGTGCAGACTCTAGTTGGAGGTGTACGATTTAAAGTTGACCAGAAACGCCTTGAATCAGATCCTTGCCAGATGCTTGTTGCTACACCTGGTAGGTTGCTGGATCATATCGAGAATAAGACCGGAATATCTGTACGACTGATGGGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTGCTGGACCTTGGGTTTCGAAAGGATATAGAAAAAATTGTTGATTGTTTACCCCGTCAAAGACAATCCTTACTGTTTTCTGCAACTCTCCCAAAGGAGGTCCGTCGAGTATCTCAGCTTGTTTTGAAAAGGGAACACAAATATGTTGATACAGTTGGAATGGGTTGTGTGGAAACTCCTGTTCAGGTAAAGCAATCCTATCTTACTGCTCCACATGAATCACACTTTCAGATAGTACATCATATCTTGAAAGAGCATATATCACAAACACCTGATTATAAGGTTATTGTTTTCTGTATAACTGGGACGGTGACATCACTCACATATCACCTTCTTCGGGATATGAAACTGAATGTTAGGGAGATACATTCTCGAAAACCTCAGCTGTATCGAACTCGTGTATCAGATGAGTTTAAAGAATCCAAACAAATGATTCTTGTCTCCTCTGATGTTACATCGCGTGGAATGAATTATCCTGATGTTACTTTAGTGATACAGGTGGGAATTCCTTCAGACCGTGAACAATATATACATCGTCTTGGAAGAACGGGACGGGAAGGCAAAGAAGGGAAAGGCATATTGTTGATTGCACCTTGGGAAGAGTACTTTTTAAATGAGATCAAGGATCTCCCTCTAGAGAAATTCCCCTTACCAGATTTAGATCCACAGGCACAGCTTAAGATTGAGCAGTCGATGGCAAAGATTGATAACGACATCAAAGAAGCAGCTTATCATGCCTGGCTTGGTTATTATAACTCCATCAGGGAAATTGGGAGGGAGAAGAGCACAGTAGCTGAGCTAGCAAGCCGATTTTCCGAATCAATTGGTTTACAGAGGCCGCCTTCTCTCTTCCGAAAAACTGCACTAAAAATGGGTTTGAAAGACATTCCTGGCATTAGAATTCGTAGATAG 2217 0.4335 MWGWMIREGRKASSMSLTAWNLTLLRNMGGGPRTFPGGVSKWKWKRMHEKRAKEKQRNLLEQEKQLYQARIRSHIRSTLSPSSYSSSSTTHNPISPYQHIKALADRFMKDGALDLWNDLDGPQTQPQTQIQSQASPQIDFPNRNLNNYSQIRGYRSVPEVRDLSDRKKVGMEKPERRRIWRKNDSSSDSGSEDEVDSKNEGYYSKVGSIAALGKYDVKRVRRMKPKDFDDETDFSEQIELIKNELKNKKLSRHEEENQGQELENVLSQTRFDECAISPLTIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIETVLKAMSSKTSHRAPPIFVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQKRLESDPCQMLVATPGRLLDHIENKTGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSLLFSATLPKEVRRVSQLVLKREHKYVDTVGMGCVETPVQVKQSYLTAPHESHFQIVHHILKEHISQTPDYKVIVFCITGTVTSLTYHLLRDMKLNVREIHSRKPQLYRTRVSDEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIAPWEEYFLNEIKDLPLEKFPLPDLDPQAQLKIEQSMAKIDNDIKEAAYHAWLGYYNSIREIGREKSTVAELASRFSESIGLQRPPSLFRKTALKMGLKDIPGIRIRR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04588 738 Coils Coil 238 263 - -
Mepo2g04588 738 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 300 483 IPR014001 -
Mepo2g04588 738 MobiDBLite consensus disorder prediction 120 145 - -
Mepo2g04588 738 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 517 658 IPR001650 -
Mepo2g04588 738 SMART ultradead3 288 499 IPR014001 -
Mepo2g04588 738 MobiDBLite consensus disorder prediction 114 145 - -
Mepo2g04588 738 Pfam Helicase conserved C-terminal domain 516 621 IPR001650 -
Mepo2g04588 738 CDD SF2_C_DEAD 498 631 - -
Mepo2g04588 738 Gene3D - 493 717 IPR027417 -
Mepo2g04588 738 PANTHER RNA HELICASE 237 667 - -
Mepo2g04588 738 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 269 297 IPR014014 GO:0003724
Mepo2g04588 738 SMART helicmild6 541 622 IPR001650 -
Mepo2g04588 738 MobiDBLite consensus disorder prediction 165 199 - -
Mepo2g04588 738 Pfam DEAD/DEAH box helicase 293 471 IPR011545 GO:0003676|GO:0005524
Mepo2g04588 738 Coils Coil 45 72 - -
Mepo2g04588 738 Gene3D - 230 484 IPR027417 -
Mepo2g04588 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 640 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04588 Mepo-Chr2 54281643 54285954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04588 269 647 Eukaryotic Initiation Factors Gene Family AT3G19760 27.525 4.60e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04588 - - gmx:100808520 1041.57