Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04568 ATGGAGAAACATGAATTGTTACTCCCTATCTCATCTTCACCAGATGCATCTCCTTTTAATGTTAAACCCGGTAATGGCTCTAATATTCATGTTAAAAAAGCAGAATATCTAAAAACTAAAAAGAAGGAGACTTCAAGCCAGAAAGGAGGCAAAGAAATAATGAAGCACAAATATGTATTTCAAACAAGGAGTCAGATTGATATACTAGATGATGGCTTCCGGTGGAGAAAGTATGGGGAAAAGATGGTGAAAGACAACAAATTCCCTAGAAGTTACTATAAATGTACTTATCAAGGCTGCAAGGTAAAGAAACAAATCCAAAGGCACTCAAAAGATGAGCAGGTCGTGGAAACAACTTATGAAGGGATGCATATTCACCCTGTAGAGAAGTCAGCTGAAAGCTTCGACCAGATCTTGAGAAACTTCATTACTAACAATCAACTATGTAATGTAACTCCTGTGTAA 465 0.3677 MEKHELLLPISSSPDASPFNVKPGNGSNIHVKKAEYLKTKKKETSSQKGGKEIMKHKYVFQTRSQIDILDDGFRWRKYGEKMVKDNKFPRSYYKCTYQGCKVKKQIQRHSKDEQVVETTYEGMHIHPVEKSAESFDQILRNFITNNQLCNVTPV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04568 154 Pfam WRKY DNA -binding domain 70 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g04568 154 SUPERFAMILY WRKY DNA-binding domain 61 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g04568 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 132 IPR044810 GO:0003700
Mepo2g04568 154 SMART WRKY_cls 69 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g04568 154 FunFam WRKY transcription factor 57 55 129 - -
Mepo2g04568 154 Gene3D WRKY domain 53 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g04568 154 ProSiteProfiles WRKY domain profile. 64 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04568 Mepo-Chr2 54136413 54137437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04568 57 139 WRKY Transcription Factor Family AT5G13080 71.084 3.08e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g04568 WRKY 7.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04568 - - mtr:25502011 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04568 2 54136413 54137437 Mepo2g04568 2 54136413 54137437 ECH