Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04546 ATGGATAAGCTGAATTTTATTAAAAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAACCAACAGATGAAGAGCTTGTGTTTAATTATTTGAAATGTAAAATCTTCTCATGCCCCTTGCCTGCTTCCATCATTCCTGAGGTCAATGTTTGCAAGTATGATCCTTGGGATTTGCCAGGAGGTTGTGATGAACAAGAGAGGCACTTTTTCAGCTCCAAGGAAGCAAAGTATAGAAATAGTAATCGGATGAGTAGAACAACAAAATGTGGATATTGGAAGGCAACAGGGTCAGACAAAAAAATTTCATCTTCAACTTGTAATGGCATTGTAGGGCTAAGAAAAACTCTCGTTTTCTATGAAGGGAAATCCCCAAATGGGTCTAGAACTGATTGGATCTTGCATGAATATCGTCTCATCAACGTAGAAACTACTAACAATTCAACTCAGAACTATGGAAATGAGATAGGAGAATGGGTTCTGTGTCGGTTATCTGTAAGGAAAAGAAGTGGTTTAGAATATGGAAGCACTAGTACTCATAATGCTCCTCCTAATTCAAGATTAATGTTTGATTTTATGATGGTAAACAACAAGACATGTTCTTCTACGTCCTCTTCATGCTCAAGTTCCAGTAACAACATTGAGGTCTCTTCAAATGTACAAGATCATGAACAAGACTATGCTGATCATTTTTAA 696 0.3736 MDKLNFIKNGVSRLPPGFRFQPTDEELVFNYLKCKIFSCPLPASIIPEVNVCKYDPWDLPGGCDEQERHFFSSKEAKYRNSNRMSRTTKCGYWKATGSDKKISSSTCNGIVGLRKTLVFYEGKSPNGSRTDWILHEYRLINVETTNNSTQNYGNEIGEWVLCRLSVRKRSGLEYGSTSTHNAPPNSRLMFDFMMVNNKTCSSTSSSCSSSSNNIEVSSNVQDHEQDYADHF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04546 231 MobiDBLite consensus disorder prediction 203 231 - -
Mepo2g04546 231 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 211 - -
Mepo2g04546 231 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Mepo2g04546 231 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Mepo2g04546 231 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Mepo2g04546 231 MobiDBLite consensus disorder prediction 203 221 - -
Mepo2g04546 231 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04546 Mepo-Chr2 53897981 53899598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04546 1 171 NAC Transcription Factor Family AT5G13180 61.628 5.97e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g04546 NAM 4.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04546 - - gmx:100812015 338.191