Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04544 ATGGGTTGCGCACTCGGAAAACCTGCCGGTGCCGGAACTCGGCATCGTCGCCGAGATAACACTGCAACTGCTAACGAAGGTAATAATGCTGTTGAAGTTCAGGAGAAGCAGGAGGCTGAGGCTCCTACCGCCGGTGAACTTCCCGGCAATATTCCGGCACCGGCGAGCCTGCTACCTCGACTTAATTCATTGGGAGCAACTCAACAGAGTTGGCCGCCATGGTTGATGGAAGTTGCCGGTGATGCAATCCGAGATTGGACTCCTCGCCGCGCCAACACGTTCGAGAAGCTTGCTAAGATTGGGAAAGGGACTTATAGCAATGTGTACAAAGCTAAAGACCTTGTTACCGGAAAGGTAGTGGCATTGAAGAAAGTTAGAATTGATAATTTGGACGCTGAGAGTGTGAAGTTTATGGCAAGAGAGATTCTTGTTTTGAGGAAGCTTGATCACCCCAATGTTATAAAGCTTGAGGGTTTGGTTACTTCGAGAATATCATCAAGTCTTTACTTGGTATTTGAGTACATGGAACATGATCTTGCTGGTCTTATAGCTGGCCTTGGTGTCAAATTCTCTGTGCCTCAGGTCAAATGTTATATGAAACAATTATTGTCTGGCCTTGAGCATTGCCATAGCCGAGGTGTATTGCACCGCGATATCAAGGGCTCCAATTTGCTTATTGACGACGAAGGAATACTTAAAATTGCAGATTTTGGACTCGGGACTTTCTACGATTCTAAGCAAAAGCATCCGATGACTAGTAGAGTCGTGACCCTTTGGTATCGTCCCCCCGAGCTTCTTCTTGGAGCTACATTCTATGGTGTTGGGGTTGATCTTTGGAGCGCTGGCTGCATTTTGGCAGAGCTTCTTGCCGGAAGACCAATCATGCCTGGAAGAACTGAGGTTGAGCAACTTCACAAAATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAACGCTACTCTTTTTAAGCCACAGCAACCTTATAAAAGGCGCATCTCAGAAGCATTTGCTGTTTTTCCACCTTCTTCATTACCTTTAATTGGAACTCTTCTTGCAATAGATCCTGATGATCGCGGCACTACCTCGTCTGCTCTGATCAGTGAGTTCTTCACCACTGAACCATATGCTTGTGAACCATCAAGTTTACCAAAGTACCCTCCCAGTAAAGAATTAGATGTGAAGCTGAGAGACGAAGAAGCAAGAAGGCAAAGAGCTCTAAGTGGAAAATCTAATGCAGTTGATGGTGCCAGACAAAGTAGAGTACGTGACCGCAGTCATGCCATTCCAGCCCTAGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTTGGGAGTTGTGACAAATGGAAATGGAAAAAGTAAAAGTGAGAAATTTCCACCTCCTCATGAAGATGGAGCTTTCGGATATCCGGGAGATGGATCAAATAAAGGAGCTGTTTCATTTGGAACAACTGAAAAAACTTCATTTAGTTCAATATTATCTAGTTCAATACATTCTAAATCTGTTGGAAGTTATGCAGGCAGCTCTTATAAAAGGAGGAAAAGTAATGAACCAGATTCCAGGATATCATCATGGAAATTTATGCGTTCTTCTTTCAAGCCCTCAACAGTGGGTCTTTCATTTAATTTATTATTTAGAAGCAGAAGATAA 1677 0.4359 MGCALGKPAGAGTRHRRRDNTATANEGNNAVEVQEKQEAEAPTAGELPGNIPAPASLLPRLNSLGATQQSWPPWLMEVAGDAIRDWTPRRANTFEKLAKIGKGTYSNVYKAKDLVTGKVVALKKVRIDNLDAESVKFMAREILVLRKLDHPNVIKLEGLVTSRISSSLYLVFEYMEHDLAGLIAGLGVKFSVPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDDEGILKIADFGLGTFYDSKQKHPMTSRVVTLWYRPPELLLGATFYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRRISEAFAVFPPSSLPLIGTLLAIDPDDRGTTSSALISEFFTTEPYACEPSSLPKYPPSKELDVKLRDEEARRQRALSGKSNAVDGARQSRVRDRSHAIPALEANAEIQTNLDRLGVVTNGNGKSKSEKFPPPHEDGAFGYPGDGSNKGAVSFGTTEKTSFSSILSSSIHSKSVGSYAGSSYKRRKSNEPDSRISSWKFMRSSFKPSTVGLSFNLLFRSRR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04544 558 SUPERFAMILY Protein kinase-like (PK-like) 87 383 IPR011009 -
Mepo2g04544 558 MobiDBLite consensus disorder prediction 411 435 - -
Mepo2g04544 558 Gene3D Phosphorylase Kinase; domain 1 88 181 - -
Mepo2g04544 558 Gene3D Transferase(Phosphotransferase) domain 1 182 417 - -
Mepo2g04544 558 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Mepo2g04544 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Mepo2g04544 558 PANTHER CELL DIVISION PROTEIN KINASE 92 382 - -
Mepo2g04544 558 CDD STKc_CDK9_like 94 378 - -
Mepo2g04544 558 Pfam Protein kinase domain 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04544 558 MobiDBLite consensus disorder prediction 459 480 - -
Mepo2g04544 558 MobiDBLite consensus disorder prediction 1 52 - -
Mepo2g04544 558 FunFam probable serine/threonine-protein kinase At1g54610 177 418 - -
Mepo2g04544 558 SMART serkin_6 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04544 558 ProSiteProfiles Protein kinase domain profile. 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04544 558 FunFam probable serine/threonine-protein kinase At1g54610 81 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04544 Mepo-Chr2 53889612 53893428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04544 86 448 Core Cell Cycle Gene Families AT5G10270 47.532 3.41e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo2g04544 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04544 K08819 - gmx:100789359 838.18