Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04543 ATGGACGATGACCGCCAATATGAAAACGGTAGGCATAAGATGGACTACTACAGAGGAGCACATTCCCTGTGGAATGTGGATCCCCAGCATCAAATCAAGGAACAAAATGCCCTAGTTATGAATAAAAAAATTAGGTCCATTATGGCTGAAAGGCAGGCAGCTCTTCTTGAACTTGAACTAGAGGCAGCTATATCTGAAAAGAACGAAGCCCTGGCTGCTCGAGACGTTGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAAAGGGATAATGCTCTACTGGAACGGGACAATGCTCTTGCAGCCCTTCAAAGTCGGAATAGTACTACCAACTTTCCATTCAATGGTGGAATTCAACGTGGATCCAAGCGGATGCACCATTCTTCAAACCATATATCCAACATGACAGAAGCAGCATATAGCACGACGGATATAATAATAAGAGATGCCTCCCCAGTTACCGTTATAACTTCTGAAGATGTCAAATCTCATCTAATTAAGAGAACAAAGGAGAACAAAGCATCACAGACACCTACCAAAATAAAGAAAATGGGTGAGGATTTAAATAGGAAGGCTTATTCTGAAGGGACAAAGATCAAATCTGAATGGGATAGGCAGGATGTTGGCTTGAATTCGATTGCTTTCGATGAAACTGTCATGCCTGTCCCAGTTTGCACGTGTACTGGAGTACCACGACAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACCACTACATTGTCAATGCATCCACTACCACAGCTTCCTAACAAGCGCCATGCTCGCATCGGAGGGCGGAAAATGAGCGGCAATGTTTTTAGACGACTTCTCAGTAGGTTTGCATCAGAAGGCCATGACTTATCTATACCATTGGATCTTAAAGATTACTGGGCCAGACATGGAACAAATCGTTACATTACTATCAAGTAG 939 0.4388 MDDDRQYENGRHKMDYYRGAHSLWNVDPQHQIKEQNALVMNKKIRSIMAERQAALLELELEAAISEKNEALAARDVALRQRDEALAQRDNALLERDNALAALQSRNSTTNFPFNGGIQRGSKRMHHSSNHISNMTEAAYSTTDIIIRDASPVTVITSEDVKSHLIKRTKENKASQTPTKIKKMGEDLNRKAYSEGTKIKSEWDRQDVGLNSIAFDETVMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGNVFRRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04543 312 PANTHER - 1 312 IPR010409 -
Mepo2g04543 312 Pfam GAGA binding protein-like family 1 312 IPR010409 -
Mepo2g04543 312 SMART GAGA_bind_2 1 312 IPR010409 -
Mepo2g04543 312 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04543 Mepo-Chr2 53884786 53888983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04543 1 312 BBR or BPC Transcription factor family AT2G21240 57.962 3.53e-128 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mepo2g04543 GAGA_bind 5.3e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04543 - - gmx:100813103 543.888