Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04532 ATGAGAGATCTGGAAGAAGAAAGAAACATGGCATCATCAGAAGTATCTATGAAGGGAAATTCTGTCAACGGAAAAGGTGAAGGCAACGTTGATGGCGTTGGAGATGCTCAAAATGGTTCTTCATCTTCATCAACAGGAAGAGAAGCTGAAGCTGCACTTTACAGAGAACTATGGCATGCGTGTGCTGGTCCTTTGGTAACGGTTCCAAGAGAAGGAGAACTTGTGTTCTATTTTCCACAAGGACATATTGAACAGGTGGAAGCTTCGACAAATCAAGCATCGGAACAACACATGCCGGTTTACGATCTCCGACCTAAGATCCTTTGTCGGGTCATCAACGTTATGCTAAAGGCGGAGCCAGATACTGATGAGGTGTTTGCACAAGTGACTTTGGTACCAGAGCCCAATCAAGATGAAAATGCTGTTGAGAAAGAAGCTCCACCTGCTCCTCCGCCGCGATTTCATGTTCATTCGTTTTGTAAAACGTTGACAGCATCTGATACTAGTACTCACGGTGGTTTTTCTGTACTTAGACGTCATGCTGATGAATGTCTTCCTCCACTGGATATGTCAAAGCAACCACCTACACAGGAATTGGTGGCCAAGGATCTGCACGGGAATGAGTGGCGATTTAGACATATTTTTCGCGGTCAACCACGTAGACATTTGCTGCAGAGTGGTTGGAGTGTTTTTGTCAGTTCCAAGAGGCTGGTTGCTGGGGATGCATTTATATTTTTAAGAGGTGAGAATGGGGAACTTCGAGTTGGTGTAAGGCGTGCAATGAGACAGCAGGGTAATGTTCCATCCTCGGTGATCTCTAGCCATAGCATGCATCTTGGTGTTCTGGCGACTGCTTGGCATGCTGTTTTGACTGGGACCATGTTCACTGTTTATTACAAACCCCGGACAAGTCCAGCAGAGTTTATTGTTCCGTATGATCAATACATGGAGTCTCTAAAAAATAATTATACAATAGGCATGCGGTTCAAAATGAGATTTGAGGGTGAAGAGGCTCCTGAGCAAAGGTTTACGGGTACCATTGTTGGAATTGAAGACTCTGACTCCAAAAGATGGCCAACATCTAAATGGAGATGTCTCAAGGTTAGATGGGATGAAACGTCTAATATACCTCGTCCCGAGAGAGTTTCCCCTTGGAAAATAGAACCTGCTCTTGCTCCTCCAGCTCTAAATCCTCTTCCAATGCCCAGGCCTAAAAGGCCTCGAGCTAACGTGGTGCCGTCCTCCCCAGATTCTTCTGTTCTTACCCGCGAAGCATCGTCCAAAGTAAGCATGGACCCTTTGCCCACTAGTGGTTTCCAGAGGGTCTTGCAAGGTCAAGAATCATCGACCTTGAGAGGAAATATGGCTGAAAGCAACGACTCTTACACTGCAGAGAAGTCTGTTGCGTGGACTCCTGCAACTGATGAAGAAAAGATGGATGCTGTTTCTACTTCAAGAAGGTATGGCTCAGAGAACTGGATGTCAATGTCAAGGCAGGAACCAACGTATTCGGACCTTCTGTCTGGATTTGGCAGTGCCCGTGAAGGAAAACACAACATGCTTACTCAATGGCCTGTAATGCCACCTGGTCTGTCACTAAATTTCATGCACTCTAATATGAAAGGTTCTGCACAAGGCAGTGATAATGCAACTTACCAAGCTCAAGGGAATATGAGATACAGTGCATTTGGTGATTACTCGGTGCTTCATGGACATAAAGTTGAAAATCCACACGGAAACTTTTTGATGCCACCACCACCCCCAACTCAATATGAGAGTTCCCATTCTAGAGAATTGTCACAGAAACAAATGTCTGCAAAAACAAGCGAGGCTGCAAAACCAAAAGACAGTGACTGTAAGCTATTCGGCTTCTCGCTTCTCAGTAGCCCAACTATGCTGGAGCCTTCAATATCTCAAAGAAATATTACAAATGAGACTTCTAGTCACATGCAAATTTCATCACAACATCTCACATTTGAAAATGAGCAGAAGTCCGAACAATCAAAGAGCTCCAAACCAGCAGATAAACTAGTCATAGTTGATGAGCACGAGAAGCAGCTGCAAACTTCTCAGCTTCATATTAAAGATGTTCTACTCAAACCTCTAAGTGGTTCTGCTAGAAGCTGCACGAAAGTACACAAGAAAGGGATTGCGCTTGGTAGGTCGGTTGATCTTACAAAGTTTAGTGACTATGACGAATTAACCGCTGAATTGGATCAGCTCTTTGAATTTGGAGGTGAACTAATATCTCCACAAAAGGATTGGCTGGTTGTCTTCACTGATAATGAGGGTGACATGATGCTTGTTGGCGACGATCCATGGCAGGAGTTTTGTTCGATGGTTCGCAAAATTTATATCTACCCCAAAGAAGAGATTCAGAAAATGAGCCCGGGTACACTGAGTTCAAAAAATGAAGAGAATCATTCAGCTACCGATGGCGGAGATGCACAAGAAACTAAATCTCAGCTGAATCATTCAGCTTCAGATAATTGA 2493 0.4424 MRDLEEERNMASSEVSMKGNSVNGKGEGNVDGVGDAQNGSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKVSMDPLPTSGFQRVLQGQESSTLRGNMAESNDSYTAEKSVAWTPATDEEKMDAVSTSRRYGSENWMSMSRQEPTYSDLLSGFGSAREGKHNMLTQWPVMPPGLSLNFMHSNMKGSAQGSDNATYQAQGNMRYSAFGDYSVLHGHKVENPHGNFLMPPPPPTQYESSHSRELSQKQMSAKTSEAAKPKDSDCKLFGFSLLSSPTMLEPSISQRNITNETSSHMQISSQHLTFENEQKSEQSKSSKPADKLVIVDEHEKQLQTSQLHIKDVLLKPLSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFGGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGTLSSKNEENHSATDGGDAQETKSQLNHSASDN 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04532 830 Gene3D - 156 261 IPR015300 -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 814 830 - -
Mepo2g04532 830 ProSiteProfiles B3 DNA-binding domain profile. 159 261 IPR003340 GO:0003677
Mepo2g04532 830 MobiDBLite consensus disorder prediction 796 830 - -
Mepo2g04532 830 CDD B3_DNA 157 259 IPR003340 GO:0003677
Mepo2g04532 830 SUPERFAMILY DNA-binding pseudobarrel domain 155 288 IPR015300 -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 647 674 - -
Mepo2g04532 830 FunFam Auxin response factor 322 394 - -
Mepo2g04532 830 Pfam AUX/IAA family 753 795 IPR033389 -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 577 616 - -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 1 47 - -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 592 608 - -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 412 466 - -
Mepo2g04532 830 ProSiteProfiles PB1 domain profile. 707 789 IPR000270 GO:0005515
Mepo2g04532 830 Pfam Auxin response factor 285 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo2g04532 830 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 796 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo2g04532 830 MobiDBLite consensus disorder prediction 647 661 - -
Mepo2g04532 830 SUPERFAMILY CAD & PB1 domains 710 784 - -
Mepo2g04532 830 Pfam B3 DNA binding domain 159 260 IPR003340 GO:0003677
Mepo2g04532 830 FunFam Auxin response factor 703 796 - -
Mepo2g04532 830 FunFam Auxin response factor 157 261 - -
Mepo2g04532 830 MobiDBLite consensus disorder prediction 396 466 - -
Mepo2g04532 830 Gene3D - 703 796 - -
Mepo2g04532 830 Gene3D - 322 392 - -
Mepo2g04532 830 SMART B3_2 159 261 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04532 Mepo-Chr2 53759857 53764824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04532 10 828 B3 DNA Binding Superfamily AT5G62000 63.761 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo2g04532 AUX_IAA 3.6e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04532 - - gmx:100780892 1318.52