Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04531 ATGCATTTCTCTGATCTAGATGACACTCCTATGTTCCGCCAACAGCTGCTATGCTTGGAGGAAAGTGCGGAATCATTACGCCTTAGAAGCTGCAAGTTCTACAAAGGGTGCCGAAAATATACGGAAGGGCTTGGAGAGTCATATGATGGGGACATCGCATTTATAAGTTCCCTCGATAGTTTTGGAGGAGGCCATACTGATCCTCATTTCGTTGCTTTGGGAGGACCTGTAATGAACAAATTTACCATTGCTTTGAGAGAAATCACTACATACAAGGAACTTCTTCGCTCACAGGTAGACCACATGATTGATGACCGCCTATTACAAATTGTCAATGTTGACATCAACGAAGTCAAGGAAGCTCGTAAGCGTTTTGACAAAGCTTCCCTTGTCTATGACCAGGCACGTGAAAAGTTTATGTCACTGAGAAAAAGCACGAAGATTGATATTGCCACCGTCATAGAAGAGGAATTGAAGAATGCAAGAACGTCGTTTGAGGAAGCCCGTTTCAGTCTGGGATATCAGCTACTGAATCAGATGGAACCTTTCATTAGTGAGGTTTTGGATTATGTACAACAGTCAAAAGAAAATTTCGATAAGGACCAGATTTTACTTTATAAAAAAATGCAAGAATACAAAAAACAAGTTTATCAAGATAGTAGGCTGTCATTGAATGGCCCTAATGGCTCTCCTAGTGGAGACTCTGCACATCCCTTTTCTAGGATATCAAATGAAGTAGTAGATGTTGTAAAGGAATCTGCCGCAAATGGAAAGGTTCAAATCATTCGACAAGGATATCTTTCAAAGCGATCTTCCAATTTGAGAGCTGACTGGAAAAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGTTGTACTACTACCGCAAACCATGCACTGTGTCATATGGCAGCAATCCATCATCTCCAAGGAAGAATAGTCCCACTGACAATGGTTCTGGGCTTCTGGGTCGATGGCTTTCTTCTCATTACCATGGGGGTGTCCATGATGAAAGATCTGTAGCACGTCATACTGTAAACCTGCTAACGTCAACTATAAAGGTTGATGCAGATCAGTCTGATTTAAGATTTTGCTTCAGAATAATTTCTCCATCAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATGGAAAAGATAAATGGAGTTATTGCCTCCTTGTTGAGTGTCCAGACACTAGGATCTGTACGTCATATATTTATTTTTAAAAAATACATATTTGATCTCCATTCTAATTTTGATTGCTATGATTATAAAATAATTATGTGGCAGCCTCTATCAGCTAAGTCAGAAAATGGCGATGCTTACTTTGCCGACAAGAGTTCTCTAGATGAAGATCACACTGAGGTCAAAAGGTCTTCATACAAGAGTTTCTCCCCTAGGAACCACTTACGTGCATCTAAAAGTATGCAGTTGCAAAAACACAGTATAAGAAATGAAAAACCTATTGATGTTCTTAGAAAGGTGAACGGGAATGACAAATGCGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCTTTAAACCTCGGCATCCTTATATGCATTGAATGCTCTGGTGTTCATCGTAATCTTGGAGTGCATATATCAAAAGTAAGATCGCTGACACTTGATGTGAAAGTCTGGGACCACTCTGTCTTAAGTATGTTTGAGTCCCTGGGAAATCATTTTGCCAACTCAGTTTGGGAGGAGCTATTATGTTCAAGTAGTACTTTGCAAGACGTTGACACCTCTGTTGGTTCATGCAAGGCAAACAGAGACAACCTATTTCATGCAAGAAAACCAAAACATGATGATTCTATTTCATTAAAGGAAAAGTTCATTCATGCAAAGTATGCTGAGAAAATATTTATTTGCCGGACAGAGAAAAATCTTGCAGAGCAGATGTTAAAAAGCATATGTGCCAATGACAAGAAGGCAGCATACCAGCACATTGTCAAATCAGGTATGGATGTCAATACCATCAGTAGGCAAGCATTTTCAGGTGACTCTTTCAATGCGGCTTCTTTGATTAATTCAAACATTTCATCTGAAAATGAGAGTCAATTGACTGACGACATACAAAATGGTTCTAGTGCGATTCACCTGGCTTGCCTAACAAGTGACGCCGGCATGGTGGATCTGCTCATACAGCATGGAGCAGATATAAACGCTTATGATTCAAGAGGTCGAACACCACTACATTACTGTATTATCAGAGGGAAGCCTGCAGCTGCAAAAGTGCTTCTTACTAGGGGGGGCAATCCACATGTAGCTGACAAAGAAGGCAACACTCCTCTTACACTTGCATCAGAAACCGGCTGTGTTGGCAATGAAATTCTCACTCTCTTGGAAAAAAGATGA 2376 0.4049 MHFSDLDDTPMFRQQLLCLEESAESLRLRSCKFYKGCRKYTEGLGESYDGDIAFISSLDSFGGGHTDPHFVALGGPVMNKFTIALREITTYKELLRSQVDHMIDDRLLQIVNVDINEVKEARKRFDKASLVYDQAREKFMSLRKSTKIDIATVIEEELKNARTSFEEARFSLGYQLLNQMEPFISEVLDYVQQSKENFDKDQILLYKKMQEYKKQVYQDSRLSLNGPNGSPSGDSAHPFSRISNEVVDVVKESAANGKVQIIRQGYLSKRSSNLRADWKRRYFVLDSRGMLYYYRKPCTVSYGSNPSSPRKNSPTDNGSGLLGRWLSSHYHGGVHDERSVARHTVNLLTSTIKVDADQSDLRFCFRIISPSKNYTLQAENAVDQMDWMEKINGVIASLLSVQTLGSVRHIFIFKKYIFDLHSNFDCYDYKIIMWQPLSAKSENGDAYFADKSSLDEDHTEVKRSSYKSFSPRNHLRASKSMQLQKHSIRNEKPIDVLRKVNGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDHSVLSMFESLGNHFANSVWEELLCSSSTLQDVDTSVGSCKANRDNLFHARKPKHDDSISLKEKFIHAKYAEKIFICRTEKNLAEQMLKSICANDKKAAYQHIVKSGMDVNTISRQAFSGDSFNAASLINSNISSENESQLTDDIQNGSSAIHLACLTSDAGMVDLLIQHGADINAYDSRGRTPLHYCIIRGKPAAAKVLLTRGGNPHVADKEGNTPLTLASETGCVGNEILTLLEKR 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04531 791 PRINTS HIV Rev interacting protein signature 522 539 IPR001164 GO:0005096
Mepo2g04531 791 PRINTS HIV Rev interacting protein signature 503 522 IPR001164 GO:0005096
Mepo2g04531 791 PRINTS HIV Rev interacting protein signature 545 566 IPR001164 GO:0005096
Mepo2g04531 791 ProSiteProfiles Ankyrin repeat profile. 700 732 IPR002110 GO:0005515
Mepo2g04531 791 ProSiteProfiles Ankyrin repeat region circular profile. 700 731 - -
Mepo2g04531 791 ProSiteProfiles ARF GTPase-activating proteins domain profile. 491 639 IPR001164 GO:0005096
Mepo2g04531 791 Gene3D Arf GTPase activating protein 472 637 IPR038508 -
Mepo2g04531 791 SUPERFAMILY ArfGap/RecO-like zinc finger 490 630 IPR037278 -
Mepo2g04531 791 CDD ArfGap 494 623 - -
Mepo2g04531 791 ProSiteProfiles Ankyrin repeat profile. 733 765 IPR002110 GO:0005515
Mepo2g04531 791 PANTHER CENTAURIN/ARF 170 789 IPR045258 GO:0005096
Mepo2g04531 791 SUPERFAMILY PH domain-like 174 395 - -
Mepo2g04531 791 Pfam Ankyrin repeats (3 copies) 705 788 IPR002110 GO:0005515
Mepo2g04531 791 Gene3D - 253 405 IPR011993 -
Mepo2g04531 791 SUPERFAMILY BAR/IMD domain-like 6 283 IPR027267 -
Mepo2g04531 791 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 473 638 - -
Mepo2g04531 791 Pfam Putative GTPase activating protein for Arf 494 629 IPR001164 GO:0005096
Mepo2g04531 791 Pfam PH domain 262 395 IPR001849 -
Mepo2g04531 791 CDD BAR_SFC_plant 15 183 IPR035670 -
Mepo2g04531 791 SMART ANK_2a 733 762 IPR002110 GO:0005515
Mepo2g04531 791 SMART ANK_2a 700 729 IPR002110 GO:0005515
Mepo2g04531 791 Gene3D Arfaptin homology (AH) domain/BAR domain 4 218 IPR027267 -
Mepo2g04531 791 SMART PH_update 261 398 IPR001849 -
Mepo2g04531 791 SUPERFAMILY Ankyrin repeat 643 780 IPR036770 -
Mepo2g04531 791 ProSiteProfiles PH domain profile. 260 396 IPR001849 -
Mepo2g04531 791 ProSiteProfiles Ankyrin repeat region circular profile. 733 765 - -
Mepo2g04531 791 Pfam BAR domain of APPL family 6 173 IPR004148 GO:0005515|GO:0005737
Mepo2g04531 791 CDD PH_ACAP 263 400 - -
Mepo2g04531 791 Coils Coil 118 138 - -
Mepo2g04531 791 Gene3D - 638 791 IPR036770 -
Mepo2g04531 791 SMART arf_gap_3 491 637 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04531 Mepo-Chr2 53726741 53735048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04531 483 629 C2H2 Transcription Factor Family AT3G07940 38.095 1.95e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04531 K12489 - gmx:100792517 1122.07