LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo2g04528	ATGTCAGAGATGTGTGAACCAAATTCAGAGAAAGTTAGTGAAATTAGTGCTGAGTCTCCAACTCTAACTACACAAGTTGGAGCACAACCAGTAGAAACTGCTGAACCCAAAAGCAGTGAAAGAATCAAAGCCACAAGACACCCAAGATGGACTAGACAAGAAACACTTGTTCTAATTGAGGCAAAGAAAGTGATTGAAAATGGAGATCAGGTTTGCAGATACAGATCATCAACATCAGGGCTTGTTCAAACCGACCCGAAATGGGATTTGGTTTCATCATTGTGTCAGCAACATGGTGTCAAAAGAGGAGCTGTTCAATGCAGGAAAAGGTGGGGAAATCTTCTAACTGATTTCAGGAAGATCAAAAAATGGGAGTCAAATATTAAGGATGAGTCTGAGTCTTTTTGGATAATGAGAAATGATGTGAGGAAAGAAAACAAATTGCCTGGTTTCTTTGATTCTGTGGTGTACAATGTGTTGGATGGAGGGGTTTGCACTGCTGCTGCATTCCCACTGACACTGATCAAGATGATGCCGAGAGTAGAGAATGGTGATCCAGCTGAAGGTGCACCGGCGTTAGAGCAATCTAATAAAGAGGACGAAAATGAAGAGGATGAGGATGAGGCTATTGTTGATAGTGACAAAATGGGTTGGAGCACTGAGGAGGAAAACAATGAGACAAACACAAATGGAAATATGGTTAACAGTCCATTCAAAACACCAAATGCTAAGAAATCCAACATTATAGGGAGTCTCAAAGTGACACCTCCAGCAATCACACTCCCTGGTGCTGCAGAGAGACCGCCGCACCCATTTTTCCAAGGGAACTACGATCCAGGGTGTCAGAGAGAAGCTTTGTTCAATGAGGGCTACAAAAGAAAGCGGTTATCATCAGACAATTCGGAAGACACTGCAGATTTTAATGAAGATGTCATCAAAGTGCTAAGAAGGAATAGTAACATACTGAAAACTCATCTTGGAGCTCAGAACATAAATTCCCAACTGGCCAGAGACCAGCAGAAGCAGCAAAATGACAGCTTAGTTGCAGCCCTTGGCAGGCTTACTGATGCTATCACAAAAATTGCTGACAAGATGTAG	1098	0.4235	MSEMCEPNSEKVSEISAESPTLTTQVGAQPVETAEPKSSERIKATRHPRWTRQETLVLIEAKKVIENGDQVCRYRSSTSGLVQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWESNIKDESESFWIMRNDVRKENKLPGFFDSVVYNVLDGGVCTAAAFPLTLIKMMPRVENGDPAEGAPALEQSNKEDENEEDEDEAIVDSDKMGWSTEEENNETNTNGNMVNSPFKTPNAKKSNIIGSLKVTPPAITLPGAAERPPHPFFQGNYDPGCQREALFNEGYKRKRLSSDNSEDTADFNEDVIKVLRRNSNILKTHLGAQNINSQLARDQQKQQNDSLVAALGRLTDAITKIADKM	365

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mepo2g04528	365	Gene3D	-	50	120	-	-
Mepo2g04528	365	MobiDBLite	consensus disorder prediction	222	241	-	-
Mepo2g04528	365	PANTHER	TRIHELIX TRANSCRIPTION FACTOR ASR3	30	365	-	-
Mepo2g04528	365	MobiDBLite	consensus disorder prediction	1	32	-	-
Mepo2g04528	365	MobiDBLite	consensus disorder prediction	1	44	-	-
Mepo2g04528	365	ProSiteProfiles	Myb-like domain profile.	49	115	IPR001005	-
Mepo2g04528	365	MobiDBLite	consensus disorder prediction	183	241	-	-
Mepo2g04528	365	Pfam	Myb/SANT-like DNA-binding domain	48	136	IPR044822	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo2g04528	Mepo-Chr2	53705533	53707751	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo2g04528	49	130	Trihelix Transcription Factor Family	AT5G03680	31.325	1.69e-06	48.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo2g04528	-		-	tpra:123916032	586.645

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo2g04528	2	53705533	53707751	Mepo2g04528	2	53705533	53707751	ECH

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