Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04498 ATGGGTAGATCTCCTTGCTGTGAAAAACAACACACAAACAAAGGTGCTTGGTCTAAGGAAGAAGACGAACGTCTTATTAACTACATCAAACAACAAGGTGAAGGTTGTTGGCGTTCTCTTCCTAAAGCCGCAGGCTTGGCAAGATGTGGAAAAAGCTGCAGATTGAGATGGATCAATTATCTCAGACCTGATCTTAAGCGTGGAAACTTCACTCACGAGGAAGATGAACTTATTATCAGCCTCCACGCTATGGTTGGAAACAAATGGTCTCAGATTGCTCAAAAATTGGCCGGAAGAACAGACAATGAGATCAAGAACTATTGGAACACTCACATAAAACGCAAACTCTATAGCCGTGGAATTGATCCTACAACACATCAGCCACTTAAAACTTCCTCAGCAACCACCACCTCTGCGGAAGCTGCTTCTCCTCCAATGGTTGTTAATAATAATCCTTCCGTATTGCCTGTGGTACCCTCAAACAACGAGAGCAGTACTAGCAGCAGCATGAGCCACCAGAACAAGATTAAGAGTGAGTTTCGGTTATTCAGTAATTTCAGTGGCTCTCGGCTTAAAAAGTTTGTTGCAGCCGATTCTTGCTACGGTGGTGTTGAAGAATCAGTTTCAAACAGTAGCAGTGGTGTTACCGTTGAGGATATAGCTTATCCTCCTCAAATCAACTTGGAACTTTCATTGGCTATACCCTCTCCCTCTCCCTCTCAACAGCCACAGCCACAAGCTTTGTGTCTTTGTCGTCAAATATCTTTAGGGTTACATGATAGTAGCCACCAACCTTGTTGCTGCAATAATACCATGCCTATCGTTGGTGTTTCAACTTCTGCTTTCGTTGCTGCTCCACCACCTGCTACCACCGGCGCTGGGAATGGTTTTTTCAAATTTTCTGGGGCTGGGATTGTCAAGTTTTGA 927 0.4412 MGRSPCCEKQHTNKGAWSKEEDERLINYIKQQGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTHEEDELIISLHAMVGNKWSQIAQKLAGRTDNEIKNYWNTHIKRKLYSRGIDPTTHQPLKTSSATTTSAEAASPPMVVNNNPSVLPVVPSNNESSTSSSMSHQNKIKSEFRLFSNFSGSRLKKFVAADSCYGGVEESVSNSSSGVTVEDIAYPPQINLELSLAIPSPSPSQQPQPQALCLCRQISLGLHDSSHQPCCCNNTMPIVGVSTSAFVAAPPPATTGAGNGFFKFSGAGIVKF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04498 308 CDD SANT 69 112 IPR001005 -
Mepo2g04498 308 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 175 - -
Mepo2g04498 308 FunFam MYB-related transcription factor 13 66 - -
Mepo2g04498 308 CDD SANT 16 61 IPR001005 -
Mepo2g04498 308 FunFam MYB transcription factor 68 129 - -
Mepo2g04498 308 Gene3D - 69 142 - -
Mepo2g04498 308 SMART sant 66 114 IPR001005 -
Mepo2g04498 308 SMART sant 13 63 IPR001005 -
Mepo2g04498 308 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mepo2g04498 308 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo2g04498 308 Gene3D - 14 66 - -
Mepo2g04498 308 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo2g04498 308 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mepo2g04498 308 MobiDBLite consensus disorder prediction 124 151 - -
Mepo2g04498 308 MobiDBLite consensus disorder prediction 121 151 - -
Mepo2g04498 308 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo2g04498 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo2g04498 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04498 Mepo-Chr2 53438075 53439599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04498 1 149 MYB Transcription Factor Family AT4G38620 75.839 1.45e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g04498 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04498 K09422 - rcu:8287593 274.248