Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04493 ATGATGGATAAGTATGAGGTTGTTAAGGATTTGGGTGCTGGCAATTTTGGTGTGGCTAGGCTTCTCAGGAACAAGGAGACCAAGGAGCTTGTTGCTATGAAATACATTGAACGTGGCCAAAAGATTGATGAGAATGTGGCTAGAGAGATTATCAACCACAGGTCTCTTCGGCACCCGAATATAATTCGCTTCAAGGAGGTGGTTTTGACCCCTACTCATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGGGAACTCTTTGAGAGGATCTGTAATGCTGGCCGGTTCAGCGAAGACGAGGCTAGATATTTCTTTCAACAGCTCATATCTGGTGTCCATTACTGTCATGCTATGCAAATATGCCACAGAGATTTGAAGCTGGAAAATACACTTTTAGATGGAAGCCCTGCACCTCGCTTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTCCATTCCCGGCCTAAATCAACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCTAGGAGGGAGTATGATGGCAAGTTGGCTGATGTGTGGTCCTGTGGAGTGACCCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGAAATTTTAGGAAAACAATTCAGCGCATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGATTGCAAACACCTCCTATCTCGTATATTTGTTGCTAATCCATTAAGGAGAATTTCTCTCAAGGAAATCAAGAACCATCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACCGAATCAGCTCAAGCTGCATATTACCAGAGAGGCAACCCAAGCTTTTCTATTCAAAGTGTGGACGAGATAATGAAAATTGTGGGAGAGGCAAGAGAACCTCCTCCGGTATCTAGGCCGGTCAAAGGTTTTGGATGGGAAGGTGAAGAAGAAGAAGAGGAAGAAGTGGAAGAAGAGGTTGAGGAAGAGGAGGATGAAGAAGATGAGTATGACAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTTCAAATCAGTTAA 1068 0.4307 MMDKYEVVKDLGAGNFGVARLLRNKETKELVAMKYIERGQKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLRRISLKEIKNHPWFLKNLPRELTESAQAAYYQRGNPSFSIQSVDEIMKIVGEAREPPPVSRPVKGFGWEGEEEEEEEVEEEVEEEEDEEDEYDKRVKEVHASGEFQIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04493 355 FunFam Serine/threonine-protein kinase SRK2A 81 269 - -
Mepo2g04493 355 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04493 355 Coils Coil 315 349 - -
Mepo2g04493 355 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Mepo2g04493 355 MobiDBLite consensus disorder prediction 316 339 - -
Mepo2g04493 355 FunFam Serine/threonine-protein kinase SRK2E 2 80 - -
Mepo2g04493 355 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04493 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Mepo2g04493 355 PANTHER SERINE/THREONINE KINASE 3 316 - -
Mepo2g04493 355 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04493 355 MobiDBLite consensus disorder prediction 303 355 - -
Mepo2g04493 355 SUPERFAMILY Protein kinase-like (PK-like) 2 292 IPR011009 -
Mepo2g04493 355 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Mepo2g04493 355 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Mepo2g04493 355 CDD STKc_SnRK2 4 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04493 Mepo-Chr2 53394016 53397119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04493 4 264 CBL-interacting serine-threonine protein kinases AT4G24400 42.963 1.07e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo2g04493 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04493 K14498 - gmx:547968 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04493 2 53394016 53397119 Mepo3g06899 3 82684143 82687670 PCT