Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04489 ATGGCATCTGCACTAGTTCGTAGGAACATCAACAACTTGAAAAGGTTGTCTTGTTGGCGTTTGAATAATAATAACAAACAGTTGTTGTATAATGTTGAAGATGATGCATGTACGGTTTCCATTCACACAGAAGCTGTTGGCGTTGGTGTTGGATTACCATCTTACATGCGTGGTGCTGTTTTTCGGGAACCCAACAAACCTCTCACCATTGAAGAATTTCACATTCCTCGTCCCAAAGCTGGTGAACTTCTCATCAAAACCAAGGGATGTGGAGTATGCCACTCTGATCTTCATGTCATGAAAGGTGAAATCCCGTTTTCAAGTCCTTGTGTTGTGGGGCATGAGATTACTGGTGAAGTTGTTGAACATGGACAACACACTGATTCCAAAACCATTGAAAGGCTTCCAATTGGATCTCGAGTTGTTGGAGCCTTCATTATGCCTTGTGGCAACTGTTCCTACTGTTCAAAGGGCCATGATGATCTGTGCGAAGCTTTTTTTGCTTATAACCGCGCAAAAGGAACCCTATACGATGGTGAAACTCGACTATTTCTTCGAGGCAGTGGAAAACCGATATACATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCAGCAAATGCATTGGCGGTATTGCCAAACTCAATGCCATATACCGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTATGGTGCAATGGCTCATGCAGCCGAAGTGCGCCCTGGTGATACTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTCTGCAGATAGCTAGAGCATTTGGTGCCTCGGATATAATTGCTGTTGATGTTCAGGATGAAAAGCTAGAGAAAGCAAAGACACTTGGTGCAACTCACACAATAAATTCGGCAAAGGAAGATCCCATTGAAAAGATACTTGAAATTACTGGTGGAAAGGGAGTTGACGTTGCTGTTGAAGCCTTAGGGAGACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAAGATGGAGGAAAAGCAGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATAGACTTGTTCGCAGAAAGATAAAAGTTATTGGCTCATATGGAGGGAGGGCTAGGCAAGATCTTCCAAAGTTAATTAGATTGGCAGAAACAGGTATCTTCGACCTTGGCCATGCTGTTACAAGAAAATACACTTTTGAGGAGTCAGGCAAAGCATTCCAGGATCTCAACGAAGGAAAAATAGTCGGTCGGGCTGTAATCGAGATAGGATAG 1284 0.4354 MASALVRRNINNLKRLSCWRLNNNNKQLLYNVEDDACTVSIHTEAVGVGVGLPSYMRGAVFREPNKPLTIEEFHIPRPKAGELLIKTKGCGVCHSDLHVMKGEIPFSSPCVVGHEITGEVVEHGQHTDSKTIERLPIGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRGSGKPIYMYSMGGLAEYCVVPANALAVLPNSMPYTESAILGCAVFTAYGAMAHAAEVRPGDTVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLEKAKTLGATHTINSAKEDPIEKILEITGGKGVDVAVEALGRPQTFAQCTQSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIKVIGSYGGRARQDLPKLIRLAETGIFDLGHAVTRKYTFEESGKAFQDLNEGKIVGRAVIEIG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04489 427 Gene3D - 60 416 - -
Mepo2g04489 427 FunFam Sorbitol dehydrogenase 233 371 - -
Mepo2g04489 427 SMART PKS_ER_names_mod 63 424 IPR020843 GO:0016491
Mepo2g04489 427 Gene3D - 233 370 - -
Mepo2g04489 427 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 218 391 IPR036291 -
Mepo2g04489 427 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 55 424 - -
Mepo2g04489 427 Pfam Zinc-binding dehydrogenase 256 387 IPR013149 -
Mepo2g04489 427 SUPERFAMILY GroES-like 51 259 IPR011032 -
Mepo2g04489 427 FunFam Alcohol dehydrogenase (Zinc) 60 249 - -
Mepo2g04489 427 CDD Zn_ADH10 56 425 - -
Mepo2g04489 427 Pfam Alcohol dehydrogenase GroES-like domain 81 211 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04489 Mepo-Chr2 53366230 53369346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04489 70 348 Monolignol Biosynthesis Gene Families AT4G37970 27.113 1.57e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04489 - - gmx:100775182 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04489 2 53366230 53369346 Mepo2g04489 2 53366230 53369346 ECH