Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04454 ATGGGCAAGGAAAATGAGTCACCTGCGAAGAATGAACAAGTTGGTGATGATGGGTCCTCCAATGTTGAGATGAGAGATTTAGAATCTCATTCTAGACTTAGTTTGGAGAGGGAGACGGGCTTACCAAGTTGTCGCGTGTGCCAGTGCGCTGAGTCTGATAAACGAGGAGATGCTGCCCTAGAATTTTTGGGCATCACCCCAGTTATAGAAAGCAAAGGGGAAATAAAGCCCGACAGCAAGGGGGAAGTAAAGTCCGACAGCAAGGTGGAAGTGAAGTTGGATGGCAAGGAAATTTCAAAAGATACGTCTCTTAACAAAAACTTTGAAAGCAAACCTGGGATGATGGAATTTGTCGGCCCTGATGGTGAGGTTTTTGTCTGTAAGAATGATTTGGAGATTGGTTTGTCTCATGAAGATAGGTTAATTGAACTTGGTTGTTGCTGTAAAAATGACCTTGCTTTAGTACACTATGCTTGTGCACTCAAGTGGTTTATCAATCATGGATCTACAATTTGTGAAATATGTGGACATATAGCAAATAATATCAGAATAGCTGACTTCAACAAGGTTGTTGGTTCATTAAAAGAATATGAAGCACTGAGGGAAAGAACTGTCAATGGAGATCTAGGTCCCGCACAAGATCATCCAAATACTGGTGTGGATCCAGATGCTGTGGCTGCTATCCGAAGGCAACGGTTAAGTGAAATTGCACTATGGTTTTGTCCTCATAATAGTAATAACTTTAACAACAGTAGTAATGTGGACTCAGTTTCACCACTTGTTTCTGAGCAGCCGTTGAATTTTATTGTCGAAGAACCTGAACCCGTACAGAATACCCGAACTAAGTGGGCTGTAGAATGTACAGGGATCTTGCTTGCCACAGGGTTGCTTACCATCACCCTTGCATGGCTTATAGCTCCTCGTGTTGGAAAGAAAACTGCAGGAAGTGGTCTTCATATCCTTCTCGGTGGTGTTTGTGCTTTAACAGTGGTGATTTTTTTCCGCTTTTTTGTGCTTACAAGAATCAGGTATGGACCTGCACGCTATTGGGCAATATTATTTGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCACGGACGCACAGTGCTCATACAACGTGA 1125 0.4249 MGKENESPAKNEQVGDDGSSNVEMRDLESHSRLSLERETGLPSCRVCQCAESDKRGDAALEFLGITPVIESKGEIKPDSKGEVKSDSKVEVKLDGKEISKDTSLNKNFESKPGMMEFVGPDGEVFVCKNDLEIGLSHEDRLIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIANNIRIADFNKVVGSLKEYEALRERTVNGDLGPAQDHPNTGVDPDAVAAIRRQRLSEIALWFCPHNSNNFNNSSNVDSVSPLVSEQPLNFIVEEPEPVQNTRTKWAVECTGILLATGLLTITLAWLIAPRVGKKTAGSGLHILLGGVCALTVVIFFRFFVLTRIRYGPARYWAILFVFWFLVFGIWASRTHSAHTT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04454 374 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 185 IPR013083 -
Mepo2g04454 374 SUPERFAMILY RING/U-box 136 178 - -
Mepo2g04454 374 SMART ringv_2 126 176 IPR011016 GO:0008270
Mepo2g04454 374 MobiDBLite consensus disorder prediction 19 35 - -
Mepo2g04454 374 ProSiteProfiles Zinc finger RING-CH-type profile. 119 182 IPR011016 GO:0008270
Mepo2g04454 374 Pfam RING-variant domain 138 175 IPR011016 GO:0008270
Mepo2g04454 374 PANTHER ZINC FINGER, RING-CH-TYPE 13 341 - -
Mepo2g04454 374 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04454 Mepo-Chr2 53037008 53041449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04454 1 364 C3H Transcription Factor Family AT5G08750 60.858 3.13e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04454 - - gmx:100805323 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04454 2 53037008 53041449 Mepo2g04454 2 53037008 53041449 ECH