Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g04451 | ATGCAAGGAGCATTAGAGTTACCACCTGGCTTCAGATTTCACCCTACTGATGATGAGCTTGTCAATCACTACTTGTGTAGAAAGTGTGCTTCCCTTCCAATTGCTGTTCCTATTATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCATCTTCCAGAAATGGCTCTTTATGGTGAAAAAGAGTGGTATTTTTTCTCTCCAAGGGATCGTAAATATCCAAACGGTTCACGTCCGAACCGGGCTGCGGGAACCGGTTATTGGAAGGCGACCGGAGCTGATAAGCCGATTGGAAAGCCGAAGGCACTTGGGATAAAGAAAGCACTCGTTTTCTATGCTGGCAAAGCTCCCAAAGGAATTAAAACCAATTGGATCATGCATGAGTATCGTCTTGCTAATGTTGATAGATCCGCATCAAAAAATAATCACAATTTAAGACTTGATGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAATGACACAAAACCACCAATGTTTTCTGAGGAAGCTCAATTTGAGAATGAGACAAAGCCTCAGATCAAGATGAACGGTCAGGATGATTTTAGGAATAGTGATCAATTGTACACTGACACGTCAGATTCGGTGCCACGGTTTCATACCGACTCAAGCGGTTCTGAGCACGTGGTTTCACCGGATGTCACGTGCGATAAGGAAGTTCAAAGTGAGCCCAAGTGGAATGAATTTGTTTTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAGTTGAATCTTATGGATGATGGTGAAGATGACCCTTTTGCCCCTCAAGTTCAGTATCAAATGAATCAGCTTTCGGGTTGGCAAGACGTGTTTATGTACCTGCCCAAGTAA | 873 | 0.4261 | MQGALELPPGFRFHPTDDELVNHYLCRKCASLPIAVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASKNNHNLRLDDWVLCRIYNKKGKIEKYNDTKPPMFSEEAQFENETKPQIKMNGQDDFRNSDQLYTDTSDSVPRFHTDSSGSEHVVSPDVTCDKEVQSEPKWNEFVLGPDPVSAFDFQLNLMDDGEDDPFAPQVQYQMNQLSGWQDVFMYLPK | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g04451 | 290 | ProSiteProfiles | NAC domain profile. | 7 | 158 | IPR003441 | GO:0003677|GO:0006355 | |
Mepo2g04451 | 290 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 7 | 200 | - | - | |
Mepo2g04451 | 290 | MobiDBLite | consensus disorder prediction | 188 | 224 | - | - | |
Mepo2g04451 | 290 | Pfam | No apical meristem (NAM) protein | 8 | 131 | IPR003441 | GO:0003677|GO:0006355 | |
Mepo2g04451 | 290 | MobiDBLite | consensus disorder prediction | 188 | 223 | - | - | |
Mepo2g04451 | 290 | Gene3D | NAC domain | 16 | 163 | IPR036093 | GO:0003677|GO:0006355 | |
Mepo2g04451 | 290 | FunFam | NAC transcription factor | 16 | 162 | - | - | |
Mepo2g04451 | 290 | SUPERFAMILY | NAC domain | 3 | 158 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g04451 | Mepo-Chr2 | 53021812 | 53023539 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g04451 | 1 | 290 | NAC Transcription Factor Family | AT1G01720 | 62.671 | 7.11e-122 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Mepo2g04451 | NAM | 8.7e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g04451 | - | - | gmx:100170751 | 493.041 |