Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04438 ATGACATGGGATTGGGAAAAACAATGCAGATACATTGGACCTTGTACTGAAGCCAGAGAAAATGAACTTAAATGTATACTTCAGGACAAAGGTGTTCTTCTCACCACTTATGATATTGTCAGCAAAAATACCAAGTCCTTGCGTGAGATTACATGGGACTACACGATGCTTGATGAGGAATTGTGGGCATTGTATTATATCTGCTGCCCTGAGTTGCTTGGTCACAAAGAATGGTTCAAACTTAAATATGAAAAACCGATAAATGGTGGAAGTTATAAAAATGCTACGGACACACAGAAGCGTATTTCTTCATCTACATCAAAGAGTGAGGTTTTCAATCAAGCAGAAATTTCTCAGAAAAGAGAAATCGTTGTATGGCTTCCATTGAACGATGTTCAGCGGTGTCTTTATGAAGAATTTTGTAAGCGTGCGATTGTTCTCTCAGCATTTAATAAAGCACCACTGGCTGCCATTTGGATTTTGAAGAAAATATGTGATCATCCACTTCTGTTGACAAAGCGTGCGGCTGAGGATGTGTTGAACGAGATGGACTCAATGCTCAAGCCAGATGAGGTTAATGTTGCAGAAATATTGGTGAAGCATATAACGGATGTTGCAAAAACATATACGTTTAAAGATGAGAACGATGTACCATGCAAAATATCTTTTATCATGTCATTATTGGATAATTTGATCGCCGAAGGGAATAGGGTACTTATCTTTTCTCAGACTCGTATGGTGCTTAATTTTATTCAGGAATGCATAACTTCCAAAGGTTACGACTTTTTACGAATGGATGGCACAACAATATCCTATGACAGAAAAAGATTTGTTGATGATTTCCAAGATGTTGCTGGACCTCCAATATTTCTCTTGACATCCAAGGTTGGTGGTATAGGATTGACACTTACAAGAGCAGATCGTGTGATTGTAGTTGATCCTGATTGGAACCCAAGTACTGATAATCAATGTGTTGACCGAGCATATCGTCTTGGTCAAAAGAAAGATGTTATTGTGTATAGACTGATGACATGCGGAACTGTTGAAGAAAACATCTATAGAAAGCAGGTACATAAAGAAGCGTTATTCAAAACAGCTACTGAACATAAAGAACAAACTCAGTATTTTTCTTATCAGGATCTTAAGGAGATTTTCAGCCTCCCAAAAGAAGGATTTTATGTATCTGTGACTCAACGGCAATTCAATGAGGAACATGATTATCAACATAAAGTCGACGACTCTTTCCATGCACACATAGAGTTTCTGAAAAGACAAGGCATGGCTGGAATTAGTTACCACAGCTTACTGTTTTCCAAGGCAAAGCCAGTTCAAGATTGTCCTGAGGACGTAGTAACAAGGCCAAGGGGAAGAGAGATGACAAAAATACCACGGTGGTGCGAGCATTGCAATCGTCCAGGGCATACCTGTGAAAAATGTTGGAAGCTTCATGGCACACCTACTAGAGGATATAAAGGTTGTGCTCCCCAAGATAGTACCTCTGATAAGGACAAACTGTTCAACATGCAAAAGTCCCCTAACAAAGAAAGAATCAAAGATGATGTGTTTGCCACAGTTTCAAGGTACCTAATTCCCAGAGAAATTTTCAATCTTAGTTTATGCTGCAAGAGTCTCTATGCTCTTGCATCTTCTGAAAAAGTTTGGCTCACTCAATGTGATGTTATAGATATAGTGTCACTCAAAGACCTTGTTCAGTGGAGAGAGTGTGTTTCATCTTACAAATCACTTTGTCGTTTTCTTTTGAGTGTTAAACCGTTGCTTGGTATTTGGGTTCAACAGAATCCTGAACTTGGTAATCTTGTTTATGTAATGCCAGGTTTTGTTTCTGTTGTAGCGTGTCGAATAATACCTCAGGAGGTTGTTTCTTTAGGGATCCAAGATTGTTCTATCCTTTGGTCACCCGTGTTTGAAATTGTTTGCGATTTCGATGGTTCTAATATGTTTTTTCTTCATGGAAGGGAAGAAGAGGGGATAGATTGTGTTTATCATGGTTCACTCAAGTGTGTTAATAGATTTTGTAATTTATTGTTACTTGAGGTTGAATCTAGGAAACAAGATAATAATGAGGTCATGATTCCTTTTAGGAGGTTGGGTTTTAGGGATAGAAAAAAATTGCTTGAGCTCACTGCTAGTACTAGCCAAGTTAGATTAAGGTTCCTAAATCCTAATCATGAAAATGATCCATTATTTCCTAGATCAAGGGATGACCATGTTAATTTTCAGAAAGATTTGGTGCTCTTGAAGGAAAGAAGAGGATTTCTTAGTCGAATGACTCAAATGTATAAGCTTTGTAGTATTCATATTGAAAATAAAGAAAATTCTCAAGGGGAAGAAGTTGGCTCAATGGATTTAGAGGTAGATCAGGTAAGAAAGCATCATGACAATTCAAAAGCTTTTGCTTTTCCTCCAATCAATAAGGATAGTCACACACAATGCATCAAGAGAAAAAGTCTAGGTGGTTATGTTTGGGGTAATTTTAAACATATCCTTGGAAGATCTAGTTCAATTGATGACTGTGTTGTCAATATTGATCATCAACACAACACAACCGCAAGAGCAAGAGGCCATCGAAGATCCAGTACAATTGATGGCAGTGTTGTCAATATTGACCAGCAACACAACACGATGGCTGGAACAAGAGACGATCAAAGATCCAGTACAGCTGACGGCAGTGTTGTCAACATTGGTAAGAAACAGGGAACAAGATACCATCGAAGATCTAGTACAATCGATGGAAGTGTTAACAATATTAATCTTCAACACAGCATGATCGTAGGAACAAGAGATGATCGAAGATCTAGTGCAATCGATGGCAGTGTTGTCAAAATTGATCAGCAACACACCACAACCGCAGGAACTAGAGACAATGACATAGGGATTAGTTCAAGCCATGAGATAAAGAATGCAAAGCTTCAAGACCTTCTTAGATCAAGTAACACATTAAGGCTAACATTGAGTGCATTAAATGCAAAATTATCATCTTTTCGAGGTTGGCCAGATATGAACAAAAATTGGTTTGCACTTTACAAGATGCCTTTGCAAGTTCCTAAAGAAGACCAAGTGTATGCTGGTTTATGGGGAGGTACTTTTGGCTGGCCTTGTGATAAACCTTCTCAAAATAAGCCTAAAAAGGCTCTATTCTTTCTTTTGCTCTCTTACTTGGAGTCAAAAGGACAACAACTTCTCATTGGAACAAAAGTATTGGAAGGAACTCGCTACGCCTTGCATCCTAATGGTTCGGCAATGTTTATAGTGAATATCAACGAGCCTTCATCTGAACCATTTCCTTGGAACATTGATAGGGACTCATTATTGATGAATATCGAACACACTTTTGTGGGAGAAGGTATTGCAGGTGGCTATGGATTCAAATATCCAGGATCAAAATCTGGTTCCCTCTTTGTGTTTCAAAATGGTGATCTTGCCTTTGTTTGGAAGGAATCAAGAGATGTTTTGACCCTGCAAAGACTTAACTTGCAAGAACTTTTGAAGAAAGGAAGAAGAATACCTTCTCTGCCTCCCATTGACAATTTTTCATATTTGATGAAGTCCTGCTTAAATGTGTTTACAAGCTAA 3594 0.3829 MTWDWEKQCRYIGPCTEARENELKCILQDKGVLLTTYDIVSKNTKSLREITWDYTMLDEELWALYYICCPELLGHKEWFKLKYEKPINGGSYKNATDTQKRISSSTSKSEVFNQAEISQKREIVVWLPLNDVQRCLYEEFCKRAIVLSAFNKAPLAAIWILKKICDHPLLLTKRAAEDVLNEMDSMLKPDEVNVAEILVKHITDVAKTYTFKDENDVPCKISFIMSLLDNLIAEGNRVLIFSQTRMVLNFIQECITSKGYDFLRMDGTTISYDRKRFVDDFQDVAGPPIFLLTSKVGGIGLTLTRADRVIVVDPDWNPSTDNQCVDRAYRLGQKKDVIVYRLMTCGTVEENIYRKQVHKEALFKTATEHKEQTQYFSYQDLKEIFSLPKEGFYVSVTQRQFNEEHDYQHKVDDSFHAHIEFLKRQGMAGISYHSLLFSKAKPVQDCPEDVVTRPRGREMTKIPRWCEHCNRPGHTCEKCWKLHGTPTRGYKGCAPQDSTSDKDKLFNMQKSPNKERIKDDVFATVSRYLIPREIFNLSLCCKSLYALASSEKVWLTQCDVIDIVSLKDLVQWRECVSSYKSLCRFLLSVKPLLGIWVQQNPELGNLVYVMPGFVSVVACRIIPQEVVSLGIQDCSILWSPVFEIVCDFDGSNMFFLHGREEEGIDCVYHGSLKCVNRFCNLLLLEVESRKQDNNEVMIPFRRLGFRDRKKLLELTASTSQVRLRFLNPNHENDPLFPRSRDDHVNFQKDLVLLKERRGFLSRMTQMYKLCSIHIENKENSQGEEVGSMDLEVDQVRKHHDNSKAFAFPPINKDSHTQCIKRKSLGGYVWGNFKHILGRSSSIDDCVVNIDHQHNTTARARGHRRSSTIDGSVVNIDQQHNTMAGTRDDQRSSTADGSVVNIGKKQGTRYHRRSSTIDGSVNNINLQHSMIVGTRDDRRSSAIDGSVVKIDQQHTTTAGTRDNDIGISSSHEIKNAKLQDLLRSSNTLRLTLSALNAKLSSFRGWPDMNKNWFALYKMPLQVPKEDQVYAGLWGGTFGWPCDKPSQNKPKKALFFLLLSYLESKGQQLLIGTKVLEGTRYALHPNGSAMFIVNINEPSSEPFPWNIDRDSLLMNIEHTFVGEGIAGGYGFKYPGSKSGSLFVFQNGDLAFVWKESRDVLTLQRLNLQELLKKGRRIPSLPPIDNFSYLMKSCLNVFTS 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04438 1197 Gene3D - 119 418 IPR027417 -
Mepo2g04438 1197 CDD SF2_C_SNF 212 343 - -
Mepo2g04438 1197 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 226 377 IPR001650 -
Mepo2g04438 1197 MobiDBLite consensus disorder prediction 874 896 - -
Mepo2g04438 1197 SMART helicmild6 249 332 IPR001650 -
Mepo2g04438 1197 Pfam Helicase conserved C-terminal domain 220 332 IPR001650 -
Mepo2g04438 1197 PANTHER F-BOX PROTEIN FAMILY-LIKE 517 1197 IPR040275 -
Mepo2g04438 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04438 Mepo-Chr2 52870071 52889302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04438 220 386 RAD5 or RAD16-like Gene Family AT5G22750 31.138 2.52e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04438 K20093 - tpra:123916112 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04438 2 52870071 52889302 Mepo2g04438 2 52870071 52889302 ECH