Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04437 ATGGCGGCGAATAAGAGCGTCAAAAAACCCCAAAGCCTCAATGATAGTCACTATCGCTTCCTTCAAGATCTCTCTGCTCCTCCTAATCCCTCTTCCAAATCCCTCGATGATGAATACGATACTCCGATTCAACCTCGAAACATCGTCTATCAAGACGTTGATGATGATGATGAAACTATTCCTCAGTTTTCTGCCATCACCGACTTCGATTCTCCAATCGGTCAAAATTCTCCAGATAAAGTAGAAGAAGCTCCTCTTCCTAAGGTTCCACTGTTTTTCGACAATTCTTCTCTGTGTAAAAAGAAATCTCCGGAGAATTGTCAACAGCTTAATGTAGAAGAATCTCCTCTTCCTCATGAGGTTCAACAGGATTTGGATAATTGTTCTCTTAGTCAAAATTCTAATGAGAATCACCAACCAGTTATGGTTCAAAAAGCTCCTCTTCCTAACAAAGTTCCAAAGGATTTTGAGAATTACTCTTCTAGTCAAAATCATGTGGAGAATGGCCAACCAGTTGAGGTAGAAGAAGCTCCACTTCCATTTGAGGTTCCTCGTGGTTCGGATAATTGTTCTCGTGGTCAAAATTATTTGAAGATTCGCCAACCAGTTAAGGCAGAAGAAGCTCTTGTTCCAAAGGAGGTTCCACGGACTTCGGATGAGTGTTCTCTTAAAGAGGAAAAGAAGACTAAGGTTAAGGTGCAAGGGCGGCGCCATCTTTGCAAGGCTGCGGATAAAGAGGCAAGCAAAAGTGTGGCAGATGACGAGCCTACGTTTGATGGTGATCTTGTGGATTTTGATTCGCCTATTCCGGTGCAGAAAAATGTGATTGAGATTGAGGAGAGTAGGGGTAGGAATGATATTAGGGATATTTTGAATGAGCTTAGCTCCAAGTTTGATGAGCTATCGGTTGAGAAGACAAAGCCGAAGACGGTGACAAAGCCGAAGACAGTGACAAAGCCTGTTGAGCGTTTTGTGGGAGGGAAAGAAATTTTTGAAGATGAGGGTTTGGAGTTTGGGAGTGCTGGATCTTCATTTTCACCAAAACAAGATCCCCATGACATCTCATCAAAGGATACTAAGAATGATAGTGGTGGTCTTGAGTATGAATCAGATGATTCAGTTCAGGTGTTGGATCACTTTGAGCCTGAGAATGATGGTTCTATAACATTGAATGACCCACGATCTACGTATAAGTTGCAGCCTAAGATTGCAAAAATGTTGTATCCACATCAGCGGGAAGGATTGAAGTGGCTCTGGTCATTGCATGTTCGGGGTAAAGGTGGAATCTTGGGAGACGATATGGGTTTGGGAAAAACAATGCAGATTTGCGGTTTTCTAGCTGGACTGTTTCATTCCCGTTTAATTAGAAGGGTATTGGTTGTGGCCCCCAAAACACTATTGCCACATTGGATCAAAGAATTATCAGTTGTTGGCCTATCTGAGAAGACGAAAGAATATTTTGGAGCTTGTGCAAAACTCAGAGAGTATGAACTTCAGTACATACTTCAGGACAAAGGTGTTCTTCTCACCACATATGATATTGTCCGCAACAATACCAAGTCCTTAAAGGGGCATAGATATTTTGATGATGAGGACAATGAAGATGGCCCTACATGGGACTACATGATACTTGATGAGGGGCATCTTATAAAGAACCCAAGCACTCAGAGAGCTAAAAGTTTGCTCGAGATACCCAGCGCTCATCGCATTATCATTAGCGGCACGCCACTGCAAAATAATCTCAAGGAATTGTGGGCACTGTTCAATTTCTGCTGCCCTGACTTGCTTGGTGACAAAAAATGGTTCAAAGATAAATATGAAACACCTATACTTAAAGGAAATGATAAAAATGCTTCGGCCAGAGAGAAATGTATTGGTTCGTCTGTAGCAAAGGAGCTAAGGGATCATATTCAGCCTTACTTTTTGAGACGTTTAAAGAGTGAGGTTTTCAATCAAGATACGGAAAAAACAACTGCAAAACTTTCTCAGAAACGAGAAATCATTGTGTGGCTTAGATTGACCAATGTTCAGCGGCATCTTTATGAAGCATTTTTGAAGAGTGAGATTGTTCTCTCAGCATTTGATGGTTCACCACTGGCTGCCCTTACGATTTTGAAGAAAATATGTGATCATCCGCTTCTGTTGACTAAGCGGGCTGCGGAGGATGTATTGGATGGGTTGGAATCAATGCTAAAGCCAGAGGAGGTTAATGTTGCGGAAAAATTAGCGATGCATATAGCAGATGTTGCAGAAACAGATAAGTTTGAAGACAAGCATGATGTATCATGCAAAATAGTTTTCATCATGTCATTATTGGATAATTTGATCCCTGAAGGGCATAGGGTGCTTATCTTTTCTCAGACTCGCAAGATGCTTAATTTAATTCAGGAATGCATAACATCTCAAGGTTATGACTTTTTACGAATCGATGGCACAACAAAATCCTGTGACCGAATAAAAATTGTTGATGATTTCCAAGATGGTGTTGGAGCTCCAATATTTCTGTTGACATCTCAGGTTGGTGGTTTAGGACTGACACTTACAAGAGCAGATCGTGTGATTGTTGTTGATCCTGCTTGGAACCCTAGTACCGATAATCAAAGCGTTGACCGAGCATATCGTATTGGTCAAAAGAAAGATGTTATTGTGTATAGACTGATGACATCCGGAACAGTTGAAGAAAAGATCTACAGGAAGCAGGTATATAAAGGAGGATTATTCAAAACAGTTTCTGAACAGAAAGAACAAACTCGGTACTTTTCCCAGAAGGATCTCAAGGAGCTTCTCAGCCTCCCCAAAGACGGATTTGACGTGTCTGTTACCCAACAACAATTGGATCAGACACATGATTCTCAACATATAGTGGATGCCTCTTTCCACGCACATTTAGAGTTCCTGAAAAGTCAAGGCATAGCAGGAATTAGTCACCACAGTTTACTGTTTTCCAAGACAGAGCCAGTTCAGGAGGCTCCTGCGTACGAAGTAGAAAATAACCACTGGAAACCTAATCCTAATGCTAGATATACTGGAACATCATCATCTTCACATGAGCAAGTTGTTGATGGAGCTGCGTTTGCTTTTAATCCCAAGGATGTTAATGTACGCAAAAAAGAATCTTCTCCAAGCAGTGTTGGTAAATTGACCGAGTTAGAAATCAAGGATAGAATTGATCGGCTCTCCCTAATGCTCTCAAATACGGTGATGATTTCTAAATTACCTGACAATGGAGAGAAACTAAAGAAACGGATTGCTGAGCTGAATCGAGCACTTACTAAACTGAAGATGGAACAAACAAACATAGTTGAATTGGATGATATTACTGGTGAATTTGAAAGGGTGTTGAATGTATAG 3351 0.4106 MAANKSVKKPQSLNDSHYRFLQDLSAPPNPSSKSLDDEYDTPIQPRNIVYQDVDDDDETIPQFSAITDFDSPIGQNSPDKVEEAPLPKVPLFFDNSSLCKKKSPENCQQLNVEESPLPHEVQQDLDNCSLSQNSNENHQPVMVQKAPLPNKVPKDFENYSSSQNHVENGQPVEVEEAPLPFEVPRGSDNCSRGQNYLKIRQPVKAEEALVPKEVPRTSDECSLKEEKKTKVKVQGRRHLCKAADKEASKSVADDEPTFDGDLVDFDSPIPVQKNVIEIEESRGRNDIRDILNELSSKFDELSVEKTKPKTVTKPKTVTKPVERFVGGKEIFEDEGLEFGSAGSSFSPKQDPHDISSKDTKNDSGGLEYESDDSVQVLDHFEPENDGSITLNDPRSTYKLQPKIAKMLYPHQREGLKWLWSLHVRGKGGILGDDMGLGKTMQICGFLAGLFHSRLIRRVLVVAPKTLLPHWIKELSVVGLSEKTKEYFGACAKLREYELQYILQDKGVLLTTYDIVRNNTKSLKGHRYFDDEDNEDGPTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPDLLGDKKWFKDKYETPILKGNDKNASAREKCIGSSVAKELRDHIQPYFLRRLKSEVFNQDTEKTTAKLSQKREIIVWLRLTNVQRHLYEAFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGLESMLKPEEVNVAEKLAMHIADVAETDKFEDKHDVSCKIVFIMSLLDNLIPEGHRVLIFSQTRKMLNLIQECITSQGYDFLRIDGTTKSCDRIKIVDDFQDGVGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTSGTVEEKIYRKQVYKGGLFKTVSEQKEQTRYFSQKDLKELLSLPKDGFDVSVTQQQLDQTHDSQHIVDASFHAHLEFLKSQGIAGISHHSLLFSKTEPVQEAPAYEVENNHWKPNPNARYTGTSSSSHEQVVDGAAFAFNPKDVNVRKKESSPSSVGKLTELEIKDRIDRLSLMLSNTVMISKLPDNGEKLKKRIAELNRALTKLKMEQTNIVELDDITGEFERVLNV 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 129 172 - -
Mepo2g04437 1116 Pfam SNF2-related domain 424 714 IPR000330 GO:0005524|GO:0140658
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 233 256 - -
Mepo2g04437 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 660 935 IPR027417 -
Mepo2g04437 1116 Gene3D - 663 961 IPR027417 -
Mepo2g04437 1116 SMART ultradead3 402 602 IPR014001 -
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 233 266 - -
Mepo2g04437 1116 Gene3D - 381 643 IPR038718 -
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 1 46 - -
Mepo2g04437 1116 CDD SF2_C_SNF 759 887 - -
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 1 38 - -
Mepo2g04437 1116 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 767 926 IPR001650 -
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 155 169 - -
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 351 368 - -
Mepo2g04437 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 644 IPR027417 -
Mepo2g04437 1116 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 419 594 IPR014001 -
Mepo2g04437 1116 FunFam Protein CHROMATIN REMODELING 24 386 664 - -
Mepo2g04437 1116 Coils Coil 1076 1096 - -
Mepo2g04437 1116 PANTHER SNF2/RAD54 FAMILY MEMBER 225 1092 - -
Mepo2g04437 1116 SMART helicmild6 793 876 IPR001650 -
Mepo2g04437 1116 Pfam Helicase conserved C-terminal domain 767 876 IPR001650 -
Mepo2g04437 1116 MobiDBLite consensus disorder prediction 339 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04437 Mepo-Chr2 52856173 52866471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04437 407 930 RAD5 or RAD16-like Gene Family AT1G02670 24.162 9.16e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mepo2g04437 SNF2_N 2.9e-47 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04437 K20093 - gmx:100779283 1423.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04437 2 52856173 52866471 Mepo2g04437 2 52856173 52866471 ECH