Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04431 ATGGATGATGAGAGTCATAGTAATTTGCCAAATGGATTCAACACAGAAAACCCTGAAAGTCATTGTTTAAAAACAATCAACAACAACAATAATCATAATCATCATCACAATAGCAATAAAGAACAAGATCGTTTTCTTCCTATAGCAAATGTTGGTAGAATAATGAAAAAAGTTATTCCTGCAAATGGAAAAATCTCAAAGGATGCAAAAGAGACAGTTCAAGAATGTGTGTCGGAGTTCATAAGTTTTGTCACCGGGGAAGCATCGGATAAATGTCAAAGAGAAAAAAGAAAGACAATCAATGGTGATGATATTATTTGGGCTATTACAACCTTAGGCTTTGAAGAGTATGTGGAACCATTAAAATCATACCTTCAAAAATTTAGAGATACTGAAGGTGAAAAAGTCAATGTTCCAAAACAACAAAGATCTGAACAAAGGCTACATCAACATCAACATAATCAAGATGAGTTAAATAATCAACATTTCAACAATAGTGTATATACATCTTCAAATCTCATGTCTCAACCTCCTTATATGACTACTGATCAACCATTTCCACTTCCTTTCTCTCCAAATTCCATTCAAAAACAATTACGACCGCAAGATCAGATTGATTCCATAGGGCATTGGTATGAATGA 642 0.3333 MDDESHSNLPNGFNTENPESHCLKTINNNNNHNHHHNSNKEQDRFLPIANVGRIMKKVIPANGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEEYVEPLKSYLQKFRDTEGEKVNVPKQQRSEQRLHQHQHNQDELNNQHFNNSVYTSSNLMSQPPYMTTDQPFPLPFSPNSIQKQLRPQDQIDSIGHWYE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04431 213 Coils Coil 141 161 - -
Mepo2g04431 213 FunFam Nuclear transcription factor Y subunit B-3 34 158 - -
Mepo2g04431 213 Gene3D Histone, subunit A 32 168 IPR009072 GO:0046982
Mepo2g04431 213 SUPERFAMILY Histone-fold 42 159 IPR009072 GO:0046982
Mepo2g04431 213 ProSitePatterns NF-YB/HAP3 subunit signature. 76 92 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mepo2g04431 213 MobiDBLite consensus disorder prediction 157 203 - -
Mepo2g04431 213 PRINTS CCAAT-binding transcription factor subunit A signature 111 129 - -
Mepo2g04431 213 PRINTS CCAAT-binding transcription factor subunit A signature 92 110 - -
Mepo2g04431 213 PRINTS CCAAT-binding transcription factor subunit A signature 73 91 - -
Mepo2g04431 213 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 45 109 IPR003958 -
Mepo2g04431 213 MobiDBLite consensus disorder prediction 1 43 - -
Mepo2g04431 213 MobiDBLite consensus disorder prediction 7 33 - -
Mepo2g04431 213 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 19 165 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mepo2g04431 213 MobiDBLite consensus disorder prediction 132 213 - -
Mepo2g04431 213 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04431 Mepo-Chr2 52816432 52817073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04431 40 211 CCAAT-HAP3 Transcription Factor Family AT2G13570 66.848 1.52e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo2g04431 CBFD_NFYB_HMF 3e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04431 K08065 - gmx:100778216 340.502