Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04423 ATGATGGGGAGTGAATGCAGTCTGAAGCTTCCTCCTGGGTTTTACTTTTCTCCAACGGATGAAGAACTAGTCCTTCATTTTCTCTATTCCAAGGCTTCTTTACCATATCATCAAAACATCATACCTGAACTTCACTTGTCTCACCATGATCCTTGGGAAATATACGGTAAAGCATTGTCAAGTGGAAATGAGCACTACTTTTTCACCGAAGTGAAGGAAAATAGAAGCACTGAAAATGGATATTGGAAGGAAATTGGGGTCACAAAACCTATAAATAAATTGGGAATGAAGAAGTACCTTGTATTCAACCTTGAGGAAGGAATTGAAACAAGTTGGGTAATGGAAGAATATCATATTTCCTCATCTCCTGATCATAATTGGAGAAAATGGGTTTTATGCAAAGTTTATGAAAAGAAGATGTCACAACAAGGTGCAAGCGATGAGGATATTGATGATAATGGAACAGATGTGTCATGGCTAGATGAAGTTTTTATGTCTATAGATGATGATCTTGATCAAACAAGCCTACCTAATTAG 537 0.3706 MMGSECSLKLPPGFYFSPTDEELVLHFLYSKASLPYHQNIIPELHLSHHDPWEIYGKALSSGNEHYFFTEVKENRSTENGYWKEIGVTKPINKLGMKKYLVFNLEEGIETSWVMEEYHISSSPDHNWRKWVLCKVYEKKMSQQGASDEDIDDNGTDVSWLDEVFMSIDDDLDQTSLPN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04423 178 PANTHER NAC TRANSCRIPTION FACTOR 56 10 146 - -
Mepo2g04423 178 Gene3D NAC domain 19 143 IPR036093 GO:0003677|GO:0006355
Mepo2g04423 178 ProSiteProfiles NAC domain profile. 10 138 IPR003441 GO:0003677|GO:0006355
Mepo2g04423 178 SUPERFAMILY NAC domain 7 138 IPR036093 GO:0003677|GO:0006355
Mepo2g04423 178 Pfam No apical meristem (NAM) protein 11 119 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04423 Mepo-Chr2 52754665 52756281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04423 1 139 NAC Transcription Factor Family AT1G77450 41.975 1.45e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g04423 NAM 2.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04423 - - mtr:11435699 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04423 2 52754665 52756281 Mepo2g04423 2 52754665 52756281 ECH