Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04412 ATGGCTATACCGAAATTGATACCTGGATTTCGATTCTCTCCAACGGGAGTTGAATTGATTAAATACTTTCTTAAGAGGAAAGTGTTGGGAAAAAAGTTTCATAATGATGTCATTGCTGAACTTGACATATACAAATACGCTCCTTGGGATCTCCCAGAATTATCTTATCTCCAAAACGGGGATTTGGAGTGGTACTTTTTCTGTCCGATTGAAAAGAAGTATCGAAGTGGGCCAAGGATGAAAAGAGCTACGGAAATTGGGTTTTGGAAAGCTACTGGTCAAGATAGAGCTGTTCAACAGAATAATCAAACTGTGGGGATGATTAAAACCCTAATATTTCACACTGGAAAATCACCTCGTGGTGATCGAACCAATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGACTTGGCTGACAAACGAATTGTTCAGGATTCCTACGTGATCTCTAAGGTATTTCAAAAAGAGGGTCCTGGTCCTAGAAATGGGGCGCAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGATGATGATGTAGGAATACCTTTTGCTGAATCGGCTGCACTAGTTCCCAGTTTGCCCGTGACATCTAATTGTTCTGTTCTAAATGATCAGAATCTCCAAACTAGTGAATATATTGGTTCAATATCCATGCCGTGTCAATCAGAATTAGTGCCTTCTCCGGACCGAACAAATTCATGTCAAACAGGATTGACACCTTCTCCTGACCCTGCAAATCCATGTCAAACAGGATTTAAGCCTTATCCAGACCCTGTGAATTCTTGTCAAACAGGAGGATTTATGCCGTCTCCCAACCCAGCAAATTCATGTCAAACAGGATTGACGCCTTCTCCTGACCCTTCAAATTCTTGTCAAACAGGATTTATGCCTTATCCAGACCCTGTGAATTCTTGTCAAACAGGATTTATGCCTGCTTCCGACCCTGCAAATTCATGTCAAACAGAATTTATGCCTTATCCAGACCCTGTGAATTCTTGTCAAACAGGATTTATGCCTGCTTCCGACCCTGCAAATTCATGTCAAACAGAATTTATGCCGTCCCCTGACCTTGCGAGTTCATGTGAAATAGGATTGATGCCTTTGCCCGACCCTGCAAATGATTCATATCCAGACAATCAAGCTGTTAATAATGATGATGACGATATTCTAGCAATGCTTGATATTTTCAAAGACAACAGTGTATTGCCTGCACCCGACCCTGCAAATGATTCATATCCAGACAATCAAGCTGTTAATAATGATGATGATGATATTCTAGCCATGCTTTATATTTTTGAAGAGAATGGTGTATTGCCTGAAGAAAACATTGCTGAAGGTGCACTTTTAACTGACTTTTTTGATGGCTTGGAAGACGTGGATTGCTCGGCTGAATTGGGATCTGTTGGCCAGAATGTGGACTTTAGCACATACGGACTGGCTTCTACGGGCAATGTTGTGGGGCATGACGACTTCGATTTCATGGAGTTGATTGTTCTAGACTCTGATACGTTCTGGCAGACCCAACCTGAAAGTTGGAGTCGAAATAAATAA 1557 0.4149 MAIPKLIPGFRFSPTGVELIKYFLKRKVLGKKFHNDVIAELDIYKYAPWDLPELSYLQNGDLEWYFFCPIEKKYRSGPRMKRATEIGFWKATGQDRAVQQNNQTVGMIKTLIFHTGKSPRGDRTNWVMHEYRLEDKDLADKRIVQDSYVISKVFQKEGPGPRNGAQYGRPFNEEDWSDDDVGIPFAESAALVPSLPVTSNCSVLNDQNLQTSEYIGSISMPCQSELVPSPDRTNSCQTGLTPSPDPANPCQTGFKPYPDPVNSCQTGGFMPSPNPANSCQTGLTPSPDPSNSCQTGFMPYPDPVNSCQTGFMPASDPANSCQTEFMPYPDPVNSCQTGFMPASDPANSCQTEFMPSPDLASSCEIGLMPLPDPANDSYPDNQAVNNDDDDILAMLDIFKDNSVLPAPDPANDSYPDNQAVNNDDDDILAMLYIFEENGVLPEENIAEGALLTDFFDGLEDVDCSAELGSVGQNVDFSTYGLASTGNVVGHDDFDFMELIVLDSDTFWQTQPESWSRNK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04412 518 MobiDBLite consensus disorder prediction 226 247 - -
Mepo2g04412 518 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Mepo2g04412 518 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Mepo2g04412 518 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mepo2g04412 518 FunFam Nac domain-containing protein 86 15 159 - -
Mepo2g04412 518 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 231 - -
Mepo2g04412 518 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04412 Mepo-Chr2 52654081 52657896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04412 1 235 NAC Transcription Factor Family AT5G09330 53.138 1.85e-83 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo2g04412 NAM 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04412 - - mtr:11427573 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04412 2 52654081 52657896 Mepo3g06823 3 81989979 81994115 PCT