Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04404 ATGGCTTCTCTCTTTACTTTCTCTCTCTTCCTTTTCATCACTCTCTCCTCCGCCACTCGCCACCACCACCACCAACCCACTCCCTCTCCCTCCGTTTCTCCCAATGCCTCGTCGGAGATCCAACAAGCCTGCAAAGCAACTCGCTTTCCTCAACAATGCGAATCATCTCTCACTCATCTCCCTCCAAATCCCACCGCTCTTCAAATTCTCCAATCCGCCATCAACCTCTCATCTACCAATCTCGTAACCGCCCAATCCATGGTTAAGGCTATTCTAGATTCTTCCTCAGCTAGCCGTAACCGTACCGTCGCCGCCACCACCTGCATCGAAATACTAACGAATTCACAGCGCCGCATTTCTACCTCCAACGACGCTTTAACACATGGAAAAATCAAAGACGCTCGAGCATGGCTGACCGCCGCCTTAGCTTACCAGTATGACTGCTGGAACAGCCTGAAATACGCCAACGACACACACGCCGTCGGTGAAGCTATGTCGTTTATCGATTCCCTTGAAACGCTCACTAGTAACGCTCTTGCCATGGTGTTTTCCTACGACGTTTATGGAAAAGACACGTCGTCGTGGAAGCCACCAACCACCGAGCGCGATGGTTTATGGCAGGCAACTGGATCGGGCGGAGGATCGGTGTCTAGCATAGGGATTCCGGCGAAGTTGACGCCGGATGTTACAGTGTGTAAGAGAGGGGAGAACGAATGCTATAAGACGGTGCAAGAAGCGGTTAATGCTGCGCCGGATAACGGTGTTGACGGGAAGAGGTTTGTTATATATATTAAAGAAGGGGTTTATGAGGAAACAGTTAGGGTTCCGTTAGAGAAGAGGAATGTGGTGTTTTTGGGTGATGGAATCGGGAAGACGGTTATTACTGGTTCTGCTAATGTGGGCCAGCCCGGAATGACTACTTACAATTCCGCCACCGTAGCGGTTCTTGGCGACGGATTCATGGCTAAAGATCTAACGATCGAAAACACAGCAGGTCCTGATGCACACCAAGCAGTGGCATTCAGATTAGACAGTGATCTTTCTGTAATTGAGAATTGTGAATTTTTAGGAAATCAAGATACTCTTTATGCTCATTCTCTGCGCCAATTCTACAAATCGTGCCGCATTGTTGGCAACGTAGATTTTATCTTCGGAAACTCAGCTGCAATCTTCCAAGACTGTCAAATCTTGGTTCGTCCTAGACAACTCAAGCCAGAGAAGGGTGAGAACAATGCCATCACAGCTCATGGTAGAACCGACCCTGCACAGAGTACAGGATTTGTTTTCCAGAACTGTTTGATTAATGGAACTGAGGATTACATGGCATTGTATCATAGTAATCCTAAAGTGCATAAAAACTATTTGGGTAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATTCATTCAGTATTAGAAGTCCTTGTTACACCTCAGGGTTGGATGCCATGGAGTGGTGACTTTGCACTTAAGACACTTTATTATGGAGAATTTGAGAATTCTGGTGCTGGTTCTGATTTGTCTCAGAGGGTGTCTTGGAGCAGTAAAATTCCCGCTGAACATGTGTCGAGTTATTCAGCGGAGAATTTTATTCAAGGGGGTGAATGGATGCAGTCATCTCAGTTATCAGCACATCATGGCAGGAGTCATCACAGCACCCATAGGAGGCATCAGTAA 1677 0.4705 MASLFTFSLFLFITLSSATRHHHHQPTPSPSVSPNASSEIQQACKATRFPQQCESSLTHLPPNPTALQILQSAINLSSTNLVTAQSMVKAILDSSSASRNRTVAATTCIEILTNSQRRISTSNDALTHGKIKDARAWLTAALAYQYDCWNSLKYANDTHAVGEAMSFIDSLETLTSNALAMVFSYDVYGKDTSSWKPPTTERDGLWQATGSGGGSVSSIGIPAKLTPDVTVCKRGENECYKTVQEAVNAAPDNGVDGKRFVIYIKEGVYEETVRVPLEKRNVVFLGDGIGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIVGNVDFIFGNSAAIFQDCQILVRPRQLKPEKGENNAITAHGRTDPAQSTGFVFQNCLINGTEDYMALYHSNPKVHKNYLGRPWKEYSRTVFIHSVLEVLVTPQGWMPWSGDFALKTLYYGEFENSGAGSDLSQRVSWSSKIPAEHVSSYSAENFIQGGEWMQSSQLSAHHGRSHHSTHRRHQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04404 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 184 IPR035513 -
Mepo2g04404 558 Pfam Plant invertase/pectin methylesterase inhibitor 39 181 IPR006501 GO:0004857
Mepo2g04404 558 Pfam Pectinesterase 228 533 IPR000070 GO:0030599|GO:0042545
Mepo2g04404 558 Gene3D - 222 548 IPR012334 -
Mepo2g04404 558 FunFam Pectinesterase 222 548 - -
Mepo2g04404 558 SUPERFAMILY Pectin lyase-like 227 540 IPR011050 -
Mepo2g04404 558 FunFam Probable pectinesterase/pectinesterase inhibitor 51 38 184 - -
Mepo2g04404 558 CDD PMEI-like_3 43 182 - -
Mepo2g04404 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 182 IPR035513 -
Mepo2g04404 558 MobiDBLite consensus disorder prediction 21 41 - -
Mepo2g04404 558 PANTHER PECTINESTERASE 14 538 - -
Mepo2g04404 558 NCBIfam pectinesterase inhibitor domain 5 181 IPR006501 GO:0004857
Mepo2g04404 558 SMART PMEI_2 35 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04404 Mepo-Chr2 52558310 52561025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04404 32 540 Carbohydrate Esterase AT5G09760 66.154 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04404 - - mtr:11442613 1036.17