Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04399 ATGCTGAGCTGTGATGATGAAGATATTGATCTATTCTATGACTCATTGGATAGTTTGTCAGGTGAAGGTTCTGTTTTAGACGAAGAAGAGTTTGGTTCTGAAAGGAGAGGTTGTTTTGATTATGATGAAATTTGGGTGAATGAACCTATTAGTGTGAAGGAAAGAAGGGAACGTTTTCTGCAGGGTATGAATTTAGCTTACATTTCTTCCAAGGTTTGTTCACAAGAGAAAACAACGAGTTTTGATGACTTGTTGGTCACCTTGGGGTCGGAGAGGATCATGGCGAGCAGTGGAGCAGTCTCAAATGCAAGCATTTCACCTTCTGGTAAAGTATCTATGAAGTTGGTTCTCTCTGGATGGAATGCAGCTTCTGAAGCTGAAGTCTTGTTGGAAGAACTTAAAAGGCGTCGTGAGTATGAAGTGGATGCAAGTTTTCAAGAGCACAAGCAGAGAGAAGGTGAGGCAAAAGAAGAATTTTGGGATTTCGATAATGGTAAAGCTAATAGGAAAAACTGGTTGAAGCGTTTTGTGAACATCAGGAAAGGCGACAAAGGAAATTTTAGATCAAAACTGAATGCAGCAACGAATAAAACTCGTAGAGTCAAGGTAAGGCAGAATAAAAAGAGGTGGATGGAGTTCAGTGAGGTATACATTGGACAAGAAATTAGAGCTCACAAAGGACTAATATGGACTATGAAATTCAGTCCCAATGGTCAGTATTTGGCTAGTGGAGGTGAAGATGGTGTTGTGCGCATATGGCACGTTTTGTCCCGTGACCAAAACCGTCCTCCCTTCGTTTCCCTTCCAAATGATAATTTTCAAATTGAGGAATCACCACTTCAAGAATTGTTTGGTCATTCCAGTGATATCTTGGATTTGGCTTGGTCTAATTCAGATATTCTTCTTTCGTCTTCGATGGATAAAACTGTTCGCGCTTGGAAAATCAGTTCTGATCAATGTCTAAGTGTTTTCCCTCACAAAGGCTTTGTGACATGCATTCAATTCAACCCTGTCAATGAAAATTACTTTATCAGTGGATCCATTGATGGTAAAGTTCGAATATGGGGAATACGCGAAGAACGAGTTATTGACTGGGCAGATATACGAGATGCCATAAGTGCTATAAGTTACCAACAAGATGGAAAAGGATTTGTAGTTGGTTCTCTTACAGGCACATGCCGTTTATATGTTGCTTCAGGAAAATATTTCCAGCTTGAGGCGCAGATAGATATCCGTGGAAAGAATAAAGCATCAGGCAACAAGATTACTGGCATTCAGTTCTTCCAAAACAACTGTCGGAGAATTATGATCACATCTGAAGATTCCAAAATCTGCATATTGGATCGAACTGAGATTGTTCAGAAATACAAAGGCCTTCCATGGTCAGGAAGTCAGATGTCCGGTTCATTTACATCAAGTGGGAAACATATAATTTCAGTCGGAGAGGACTCGCGCGTGTATATTTGGAACTTCAATGACTTCAAAAGTGGTTCTTCGAAAAAAACGAAATCGGACTATTCTTGTGAGTACTTTTCCTTCAAGGGTGTAACTGTTGCAATACCTTGGTGTGGCATGAAAACAGATAGACTTGGCTGTAGAATTAACTTTTCTCACTATTCTCCGGAAGCCAAAACCAAGCTAGAGGTTGCTTCTGAGGGTAGAGATACAGAACGATTTTCTCTTGGTAATTGGTTCTTCATTGATGGTACATGCCGAGGTTCTACTTCTATGACATGGCCTGAGGAGAAACTTCCAACATGGGATTTACCTCTTGTAGAAGATGAATGTGATCATCAAAATTTATGTCACGAAGATAGTAGCCATGGAAGGAATATATCAGAAACATGGGGTCTAACAATAGTAGCAGCTGGCAGTGATGGAACTATCAAGACATTTCACAATTTTGGCTTGCCTGTTAGGCTTTAG 1926 0.4019 MLSCDDEDIDLFYDSLDSLSGEGSVLDEEEFGSERRGCFDYDEIWVNEPISVKERRERFLQGMNLAYISSKVCSQEKTTSFDDLLVTLGSERIMASSGAVSNASISPSGKVSMKLVLSGWNAASEAEVLLEELKRRREYEVDASFQEHKQREGEAKEEFWDFDNGKANRKNWLKRFVNIRKGDKGNFRSKLNAATNKTRRVKVRQNKKRWMEFSEVYIGQEIRAHKGLIWTMKFSPNGQYLASGGEDGVVRIWHVLSRDQNRPPFVSLPNDNFQIEESPLQELFGHSSDILDLAWSNSDILLSSSMDKTVRAWKISSDQCLSVFPHKGFVTCIQFNPVNENYFISGSIDGKVRIWGIREERVIDWADIRDAISAISYQQDGKGFVVGSLTGTCRLYVASGKYFQLEAQIDIRGKNKASGNKITGIQFFQNNCRRIMITSEDSKICILDRTEIVQKYKGLPWSGSQMSGSFTSSGKHIISVGEDSRVYIWNFNDFKSGSSKKTKSDYSCEYFSFKGVTVAIPWCGMKTDRLGCRINFSHYSPEAKTKLEVASEGRDTERFSLGNWFFIDGTCRGSTSMTWPEEKLPTWDLPLVEDECDHQNLCHEDSSHGRNISETWGLTIVAAGSDGTIKTFHNFGLPVRL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04399 641 ProSiteProfiles Trp-Asp (WD) repeats profile. 222 263 IPR001680 GO:0005515
Mepo2g04399 641 PRINTS G protein beta WD-40 repeat signature 301 315 IPR020472 -
Mepo2g04399 641 PRINTS G protein beta WD-40 repeat signature 241 255 IPR020472 -
Mepo2g04399 641 PRINTS G protein beta WD-40 repeat signature 343 357 IPR020472 -
Mepo2g04399 641 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 222 255 - -
Mepo2g04399 641 PANTHER WD REPEAT DOMAIN 44 266 638 IPR040324 -
Mepo2g04399 641 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 233 253 IPR000009 GO:0000159|GO:0019888
Mepo2g04399 641 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 425 453 IPR000009 GO:0000159|GO:0019888
Mepo2g04399 641 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 290 318 IPR000009 GO:0000159|GO:0019888
Mepo2g04399 641 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 323 358 - -
Mepo2g04399 641 SMART WD40_4 358 397 IPR001680 GO:0005515
Mepo2g04399 641 SMART WD40_4 276 314 IPR001680 GO:0005515
Mepo2g04399 641 SMART WD40_4 317 356 IPR001680 GO:0005515
Mepo2g04399 641 SMART WD40_4 408 448 IPR001680 GO:0005515
Mepo2g04399 641 SMART WD40_4 449 490 IPR001680 GO:0005515
Mepo2g04399 641 SMART WD40_4 215 254 IPR001680 GO:0005515
Mepo2g04399 641 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 283 317 - -
Mepo2g04399 641 ProSiteProfiles Trp-Asp (WD) repeats profile. 283 323 IPR001680 GO:0005515
Mepo2g04399 641 Pfam WD domain, G-beta repeat 278 314 IPR001680 GO:0005515
Mepo2g04399 641 Pfam WD domain, G-beta repeat 319 355 IPR001680 GO:0005515
Mepo2g04399 641 Pfam WD domain, G-beta repeat 221 253 IPR001680 GO:0005515
Mepo2g04399 641 SUPERFAMILY WD40 repeat-like 218 631 IPR036322 GO:0005515
Mepo2g04399 641 Gene3D - 205 516 IPR015943 GO:0005515
Mepo2g04399 641 ProSiteProfiles Trp-Asp (WD) repeats profile. 323 365 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04399 Mepo-Chr2 52524224 52528172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04399 211 404 Miscellaneous Gene Families AT5G08390 23.116 1.15e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04399 K20241 - gmx:100819135 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04399 2 52524224 52528172 Mepo2g04399 2 52524224 52528172 ECH
Mepo2g04399 2 52524224 52528172 Mepo3g06804 3 81802784 81806900 PCT