Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04396 ATGCATCTCTTAAAATCGCTGAGGCACAATAACATAGTAAGATTCTATAATTCTTGGATTGATGACAAGCGCAGGACAGTTAATATGATTACTGAGTTGTTTACTTCGGGTAGCCTCAAACAGTATCATAAAAAACACAAGAAGGTTGACTTGAAGGCTGTCAGGGGATGGGCGAAACAGATTCTAATGGGTTTAAACTACCTTCATAGTCACAACCCGCCGATTATACATAGGGACTTAAAATGTGATAATATATTTATCAACGGTCACCAAGGAGAAGTTAAAATTGGAGATTTAGGGCTGGCGACGTTCTTGACGCAGGCTAATGCCAAGACTGTTGTAGGAACTCCGGAGTTTATGGCACCCGAAATGTATGATGAAAATTACAACGAATTAGTTGACATATATTCATTTGGTATGTGCATGCTTGAGTTGGTTACTGCCGAGTATCCTTACAGTGAATGCAGAACCTCAGCGCAGATATACAAGAAAGTTTCATCTGGTATAAAGCCTGCTGCTCTTACTAAAGTGATAGATCCAAAGATAAAATCATTTATTGAAAAATGTATTGTTCCAGCATCCGAAAGATTGTCGGCAAAGGAGCTCCTGATGGACCCCTTTGTTCAAGTGAATGGTTCAACGAAGAACATTTCTCTTCCATTGCCAGATATTGTTCTTCCCAAATTGGGAGCCTCTAAAAACAGATGTTTGATGTCAGAAGGTCCTACTAGTGCACGTGTTGGGGCCATTTCTCTGGATATTGGTGACACTAAGGAGCTACTTGTGATCACCGTACTTGATAATTCCACTGTTGATGCATCAAGTTCTACGAGTGTTGAAATACGAAGGTTGAAGGGAGGTGATACCTTCTTTCTAAAAGGTGGTCCAAATGATGAGAATTCTATATCATTGGTTCTGCGGATAGCTAATCAGAGGGGACAAGCAAAATATATCCATTTCATCTTCTACCTTGACAGTGATACTGCTGTCTCAGTTTCAAAGGAAATGGTTGAGCAACTTGAACTTGCTGATCAGAATGTAAAATTCATAGCTGAGTTAATCGATTTGTTATTGATGAAATTGGTTCCTGAATGGAATCCTTGTGTAGCAATTGATCATCTGGTTTCTGCAAATGATAAATGGACTAGTGCTAGCCAACAGACAGACTCAGAGTTGGCTAAAAACAACGGAAGCTCAAAACATTCTACTGAAGATGCAGGTCCCTTAACCTCATTCGGAAGATCATCTCCGGATGACAATATGGATTTATGTTCTGAGATGTCATATGCTTCTGCAACATCGGACATCAATCATAAGTTGTCTATGGTTTCATTTATGTCTGCTGAATCGGGATTTGGTGGAGGTAGTCAGAGTTCGTTCACATCTGAAATTGGGGCATTGTCTGATCATAGGAGCAAGTTTTTACACACGGAGAGCAACAATATGGTGAGCTTCTCAAGTTATCCCATTAGTGTTTCCTCCTTGTCCGAACCTGATGATGAGTTGAGAGTAGAGTTAGAAATGATTGAACAGAAATATGAAGAGGCAATTAGAGATTTATACAAAAGAAGAAACCTGGCCATCCAGGAGATTAAAAAAAGAATGTCAGATAAGATGGTATCGTAG 1626 0.3961 MHLLKSLRHNNIVRFYNSWIDDKRRTVNMITELFTSGSLKQYHKKHKKVDLKAVRGWAKQILMGLNYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLTQANAKTVVGTPEFMAPEMYDENYNELVDIYSFGMCMLELVTAEYPYSECRTSAQIYKKVSSGIKPAALTKVIDPKIKSFIEKCIVPASERLSAKELLMDPFVQVNGSTKNISLPLPDIVLPKLGASKNRCLMSEGPTSARVGAISLDIGDTKELLVITVLDNSTVDASSSTSVEIRRLKGGDTFFLKGGPNDENSISLVLRIANQRGQAKYIHFIFYLDSDTAVSVSKEMVEQLELADQNVKFIAELIDLLLMKLVPEWNPCVAIDHLVSANDKWTSASQQTDSELAKNNGSSKHSTEDAGPLTSFGRSSPDDNMDLCSEMSYASATSDINHKLSMVSFMSAESGFGGGSQSSFTSEIGALSDHRSKFLHTESNNMVSFSSYPISVSSLSEPDDELRVELEMIEQKYEEAIRDLYKRRNLAIQEIKKRMSDKMVS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04396 541 MobiDBLite consensus disorder prediction 385 417 - -
Mepo2g04396 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Mepo2g04396 541 SUPERFAMILY Protein kinase-like (PK-like) 2 209 IPR011009 -
Mepo2g04396 541 Coils Coil 499 519 - -
Mepo2g04396 541 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 535 - -
Mepo2g04396 541 Gene3D - 300 414 - -
Mepo2g04396 541 Pfam Protein kinase domain 2 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04396 541 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g04396 541 Gene3D Transferase(Phosphotransferase) domain 1 34 215 - -
Mepo2g04396 541 FunFam probable serine/threonine-protein kinase WNK9 34 213 - -
Mepo2g04396 541 Gene3D Phosphorylase Kinase; domain 1 1 32 - -
Mepo2g04396 541 SMART serkin_6 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04396 Mepo-Chr2 52480513 52483369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04396 51 402 MAP Kinase Kinase Kinase AT1G49160 60.511 1.35e-157 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo2g04396 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04396 K08867 - gmx:121175054 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04396 2 52480513 52483369 Mepo2g04396 2 52480513 52483369 ECH
Mepo2g04396 2 52480513 52483369 Mepo3g06802 3 81760237 81762129 PCT