Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04394 ATGAATGTGATGGATTATGAGCAATTTGATTACTCATTCACCCCTCCTTACATGAATCAGCTGCATGAGTGTAGCTTAGAAAATTTATCACCACTCCAAGCAGAAGATCTCTTATCTCCAAATACAATCCTAGATGAAATATTGTTTGATCAAGACCAATCACAATATCTCTTACCTCCAAATACAATCCTAGACGAAATCTTCGATCAAGAAGAGTCCATGCAAGGATTGCTGCAGCAACATTCAAACCTCGACTTCAATATCATAAATCATGAACATACAATGGCTCTAGAGAATGAATTGTGTGGTGGAGTTACCGAAAAAGGCTGCGAAAATGTGTTTGTTTCGAGGGAAGAAGATTCTTATTGGAAGGAAGTTCAAGAAGAGTTAATGGAAGAGACAAGTTTAGTTGATCTTTTGCTGATAGGAGCTGAAGCTGCTGAATCACAAAACATGACTCTTGCTTCTGACATAATCGAAAAACTAAACAATTCCTCGTCTTTAGGTAAAGGCGATAGTTTATTGAACAGGTTGTGTCTTTTCTTTACTCAAGGATTGTATTATAAAACTACAAATGCTCCTAAGTTCCATTCAGAACACGTTTCTACACAGACAAGCACATTCTGTGTGTTTCAGATACTTCAAGAACTCTCTCCCTATGTAAAATTTGCTCATTTTACAGCCAACCAAGCGATTCTTGAAGCTACAGTTGGTGTCGAAGATGTTCATGTCATTGATTTTGATATCATGGAGGGAATCCAATGGCCACCGTTGATGGTTGACTTTGCAATGAGAAAGAAGACTACTTCCCTTAGAGTAACAGCAATCACAGTGGATCAGCAAAGTGAAGCCTCGGTTCAACAAACAGGCAGAAGGCTCAAAGAGTTCGCTGACTCAATCAATTTTCCGTTCACGTTCAATACAGTAATGATGGTGAGTGAAGAAGATTTCAAAGAAATTGAACTTGGTGAAACATTTATTGTCAATTGTATGATACATCAGTGGATGCCAAACAGGAGTTTCCCATTGGTCAAAACTTTTCTCGATCGCGTAACCAAATCATCACCAAGACTCGTTGTTTTGGTGGAAGAAGAACTGTATAATTTTTCTAGACTCAAATCCATGTCCTTTGTGGAGTTTTTCTGTGAGGCTTTGCATCACTATATTGCAGTTTCAGATTCACTTGTTAGCACTCTGTGGAGTAGCCATAAGATGGAGTTAGCCCTTATAGAGAAAGAGGTTTTGGGGAATAGAATCTTAGACAGTGTAAGACAGTTTCCTTGTGAAAAAGAGGAGAGAATATTGTGGGAAGAAAGTTCTTTTTATTCATTGAAAGGGTATAATTGTGTTGGTATGAGTACATGTAATATTTCACAGGCTAAATTATTGGTTAGCTTGTTTGGTAAAGGGTATCGGGTGCAATTTGAGAACTGTAAGTTGGCCTTGTGTTGGAAGTCGAGACCTTTGACTTCTGTTTCAATTTGGGTACCAACAGATTATAATATGAGTGACAAGGTCAAATAG 1524 0.3799 MNVMDYEQFDYSFTPPYMNQLHECSLENLSPLQAEDLLSPNTILDEILFDQDQSQYLLPPNTILDEIFDQEESMQGLLQQHSNLDFNIINHEHTMALENELCGGVTEKGCENVFVSREEDSYWKEVQEELMEETSLVDLLLIGAEAAESQNMTLASDIIEKLNNSSSLGKGDSLLNRLCLFFTQGLYYKTTNAPKFHSEHVSTQTSTFCVFQILQELSPYVKFAHFTANQAILEATVGVEDVHVIDFDIMEGIQWPPLMVDFAMRKKTTSLRVTAITVDQQSEASVQQTGRRLKEFADSINFPFTFNTVMMVSEEDFKEIELGETFIVNCMIHQWMPNRSFPLVKTFLDRVTKSSPRLVVLVEEELYNFSRLKSMSFVEFFCEALHHYIAVSDSLVSTLWSSHKMELALIEKEVLGNRILDSVRQFPCEKEERILWEESSFYSLKGYNCVGMSTCNISQAKLLVSLFGKGYRVQFENCKLALCWKSRPLTSVSIWVPTDYNMSDKVK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04394 507 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 121 492 IPR005202 -
Mepo2g04394 507 ProSiteProfiles GRAS family profile. 127 496 IPR005202 -
Mepo2g04394 507 Pfam GRAS domain family 136 495 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04394 Mepo-Chr2 52475324 52476847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04394 209 495 GRAS Transcription Factor Family AT1G55580 36.102 7.78e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo2g04394 GRAS 9.1e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04394 - - lja:Lj0g3v0198459.1 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04394 2 52475324 52476847 Mepo2g04394 2 52475324 52476847 ECH