Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04392 ATGGCTCTTTTTAACGATATACAGTCACTTCCCAGCCAATTCCCAGAGGATTTAAAAGTTCTTGCGGTTGATCATGACACTGATTTCCTTAATGTTGTTGTGGAAATGTCTATTCCATGCAATTATCAAGATACCACATGTTCTAAGGCTTCTTTTGCCTTTAAACTTTTGACGGAAACAAAGGGCTGCGTTGATGTGGTACTAATTGAAGCTCAAATGCCAGACATGGATTCATATGATTTTGTCCGACATGTTACCCAACAAATCAATATTCCTGTCATCATGATGTGTGATGATGGATCAACAAATGCAGTGATGAAAGCCGTTACAAACGGGGCTTGCGAATATTGGATTAAGCCTTTCATCGAGAATCAAATCAAGAACATGTGGCAGTGTGTTGCAAGGAAAATATTCAATGAAAATAAACATGATCAAATTCTTGGAATTTTGAAGGTAAAAGATCAAAGCAAAAGGGGAAGAGATGATAATGCCAGTTATCAACCCCTAACAAAGAAGAATCGTATATCATGGACATCTGAATTGCATGAACAATTTTTAAGGGTTGTGAATCAACTCGGCCTTAATAAGGCAAAGCCAAAAGCAACTCATGAAGCGATGAATGTTCCTGGTTTGACAAAAGAACAAGTTGCTAGCCATTTGCAGAGAGTGATACTTGATTTGAAGAGTTCAACCCAAGAGACACATCTAAAGAATAGAAAGTCAAAAAGGGGCGGAAAAAAATCAAAGTTTGATCAATGTCATGTTTCGTTGAACTCTGAAGTTGTTCCCTCAATACAAGACCCGGAAGTTTTAATGAACTCAGCCATACAATGTAACGACAACTCTCATGCACAACAAGATCTGATGACATTTGACGATTATGAAGATTTTAACGATATTGCCAACATTTTTACTGACCAGTCCTACATGATCCAAGATGATTCATCATCACTGTACGAAGCACAACCTCCATCGAAATATGGTATATTCAATTAG 996 0.3745 MALFNDIQSLPSQFPEDLKVLAVDHDTDFLNVVVEMSIPCNYQDTTCSKASFAFKLLTETKGCVDVVLIEAQMPDMDSYDFVRHVTQQINIPVIMMCDDGSTNAVMKAVTNGACEYWIKPFIENQIKNMWQCVARKIFNENKHDQILGILKVKDQSKRGRDDNASYQPLTKKNRISWTSELHEQFLRVVNQLGLNKAKPKATHEAMNVPGLTKEQVASHLQRVILDLKSSTQETHLKNRKSKRGGKKSKFDQCHVSLNSEVVPSIQDPEVLMNSAIQCNDNSHAQQDLMTFDDYEDFNDIANIFTDQSYMIQDDSSSLYEAQPPSKYGIFN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04392 331 Gene3D - 12 140 - -
Mepo2g04392 331 CDD REC_typeB_ARR-like 20 134 - -
Mepo2g04392 331 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Mepo2g04392 331 SMART REC_2 18 130 IPR001789 GO:0000160
Mepo2g04392 331 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 257 IPR045279 GO:0009736
Mepo2g04392 331 SUPERFAMILY Homeodomain-like 170 228 IPR009057 -
Mepo2g04392 331 FunFam Two-component response regulator 169 230 - -
Mepo2g04392 331 Pfam Myb-like DNA-binding domain 176 222 IPR001005 -
Mepo2g04392 331 Pfam Response regulator receiver domain 20 129 IPR001789 GO:0000160
Mepo2g04392 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 172 222 IPR006447 GO:0003677
Mepo2g04392 331 SUPERFAMILY CheY-like 16 155 IPR011006 -
Mepo2g04392 331 Gene3D - 169 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04392 Mepo-Chr2 52456344 52458134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04392 13 228 Response Regulator Gene Family AT2G25180 37.500 3.49e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo2g04392 Response_reg 1.3e-09 CL0304