Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04383 ATGTATGCTTCTACTTCCTTTACATTACCACTTCTCCATGAGCTTCTTGTGGAATCTCACACAAGAAGGTTACTATTCCAAAACCCAGTTGATCATCAATCACCAACAATCTCCCCAGTTCTCACACAAAACCACAATTCAACTAACTCATATTTTGGAATTCGTGTACTTGATGCAAATGTTGTGATGATACTTGCAGTTCTATTGTGTGCTCTTATTTGCTCGCTTGCATTAAACTTAATCATAAGGCGTGCCTTAAGATTTTTAAATGTAGCCCTCAACAACGACTCTTCTTCAAGTTCAAGCAACAACAATTCACCTCAATTGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTCCCAACAGTAAGTTATTCAACTGAATTGAAACTACCAAGTTTGGATACAGAGTGTATTATATGTCTCTCGGAATTCTCGAAAGGTGAAAAGGTGCGCATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACACTCATCATGCCCCAAGTGCAGACAATGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCGGAAGCACCGCCTCCTATGTTGCCAGTGCCAGAAACTATTATTAGGATTCAGCCACTAGACCATGAAGCTTTTGAATGTAACTATAGAGAAGAAAGTAGATAA 687 0.393 MYASTSFTLPLLHELLVESHTRRLLFQNPVDHQSPTISPVLTQNHNSTNSYFGIRVLDANVVMILAVLLCALICSLALNLIIRRALRFLNVALNNDSSSSSSNNNSPQLVNKGIKKKALKTFPTVSYSTELKLPSLDTECIICLSEFSKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGSEAPPPMLPVPETIIRIQPLDHEAFECNYREESR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04383 228 FunFam RING-H2 finger protein ATL73 98 187 - -
Mepo2g04383 228 SUPERFAMILY RING/U-box 118 187 - -
Mepo2g04383 228 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Mepo2g04383 228 Pfam Ring finger domain 139 182 IPR001841 -
Mepo2g04383 228 CDD RING-H2_EL5-like 139 182 - -
Mepo2g04383 228 SMART ring_2 140 181 IPR001841 -
Mepo2g04383 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 186 IPR013083 -
Mepo2g04383 228 PANTHER RING-H2 FINGER PROTEIN ATL78 17 217 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04383 Mepo-Chr2 52394421 52395107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04383 49 201 C3H Transcription Factor Family AT3G10910 48.077 1.28e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04383 K19040 - gmx:100780127 295.049