Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04380 ATGGGTGTTACTCGGCAGAAATGGTCATCGGAAGAGGAAGCGGCTCTCAAAGCTGGAGTTGTGAAGCATGGCGTAGGTAAATGGAGTAAGATACTCAAGGATCCTGAGTTTATGATGTTGGATAAATGGAGAAATATGAGTCTGAAGGCAAATGGATCATCCTCCGGGGACAACTCTCAGCTAGCAATAAAAAGGGTGCGTCATCAGGCACCAGAACAGCGTGACGACTCCATGGCTGTAAATCTTGTTACTACTATTGATGATGAAATTCTTGATGTTCAGCCTCTTCAAGTTAAAACAGATATGCTGGAAATTAAGGGTCCGGAAAGGTCTATCAAAAGATTGGACAACCTTATAGTGGAAGCAATATCTAGCTTGAATGAGGTCGATGGTTCTAATAAAACAACTATTGCTTCTTTCATTAAGAATCAATACTGCGCATCAGCAGATTTCAAAAATAAGCTGTCAGCAAAACTGGTGGATCTTGTATCTAGTGGAAAACTGATGAAGGTGAAACATAGGTACATGATTGCGCCTACCCAAGCATATTCAGATAGAGGAGGATACCCACCCATGTTATTATTGGAAGGGAGGCAGAAAGCCTCTATTAAATCTGACAAGGGTGGGGGTAATATCCCTACAAAGCCTGACATAGATTATCAAAAAAGAAAGGCTGAGATAGACTTGGAATTGGAAAAGTTAAAGTCCATGTCTTTACACGAGGTAATCGCATGTGCTGCTCAAGCAGTTGCTGAAGCAGAAGCCGCCATGGCAGAAGCTGAAGAGGCAACAAAGGAGGCAGAGGCTGCAGAAGCAGAAGCAGATGCAGCGGCAGCTATTGCAAAAGCTGCAGAAAAATCGCTAAAATCACTGCAGTAA 879 0.4289 MGVTRQKWSSEEEAALKAGVVKHGVGKWSKILKDPEFMMLDKWRNMSLKANGSSSGDNSQLAIKRVRHQAPEQRDDSMAVNLVTTIDDEILDVQPLQVKTDMLEIKGPERSIKRLDNLIVEAISSLNEVDGSNKTTIASFIKNQYCASADFKNKLSAKLVDLVSSGKLMKVKHRYMIAPTQAYSDRGGYPPMLLLEGRQKASIKSDKGGGNIPTKPDIDYQKRKAEIDLELEKLKSMSLHEVIACAAQAVAEAEAAMAEAEEATKEAEAAEAEADAAAAIAKAAEKSLKSLQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04380 292 PANTHER SINGLE MYB HISTONE 4 1 289 IPR044597 GO:0003691
Mepo2g04380 292 SUPERFAMILY "Winged helix" DNA-binding domain 109 187 IPR036390 -
Mepo2g04380 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Mepo2g04380 292 Pfam linker histone H1 and H5 family 116 172 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo2g04380 292 Coils Coil 243 287 - -
Mepo2g04380 292 Gene3D - 3 49 - -
Mepo2g04380 292 SMART h15plus2 109 174 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo2g04380 292 Pfam Myb-like DNA-binding domain 5 33 IPR001005 -
Mepo2g04380 292 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Mepo2g04380 292 Gene3D - 109 185 IPR036388 -
Mepo2g04380 292 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 111 179 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo2g04380 292 CDD SANT_TRF 6 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04380 Mepo-Chr2 52372932 52377053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04380 1 257 Single Myb Histone (SMH) Gene Family AT1G49950 45.091 1.47e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04380 K09422 - gmx:778173 241.506