Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04365 ATGCCATTGCCAATGATGTTTCCTGGTCTTAATAGAGAGGGAGAGATGTCAGCTATGGTCTCTGCTTTAACACATGTGATATGTGGTGATCAGAACAATGATGGTGGTGGTGATGGTTATAATGTTCTGAATCAGAATATGAATAACAATGCATTTGAAGGAGATGGTATTGATATTAAGCCTTTTGGTTCTTCTTCAACTTCTTTATCTTATGGTGGCAATTCTGCACTCAAGAGAAGAAGGGAAGATGGTGGATTCTTTGACAATTCATCTTCTCCTATCACCCAAATTAAGCACCAAGGTGTAGAATGTTCAAGCAACTGGACAAACACAGTAACAACAACGACAGGAAGGAGCCAAATTGAAGAACAAATATATGAATACAGAACAGACAATAACAATGTGAAAAATGAAGACCAACCAAAAAGAAAATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCAGCAGAGATAAGAGATCCTTTCAAAGCTACAAGAGTATGGTTAGGTACATTTGAAACAGCTGAAGATGCAGCTAAAGCCTATGATCAAGCTTCATTGCGTTTTAGAGGGAACAAAGCAAAACTCAACTTTCCTGAAAATGTTAGGCTCAAGCAGGAACAATCTTTCGTTAATCCAACACCGACCAATTTGAACATTTCACATTCAAATAGTGCCCTTTTGTCACATCAACCTAGAACTGATCCTATGGTTCACAATCAAGTTCTTCATACTTTGCAAAGTTCAAACAAGTATTATGACTACTTCAATGGTCAAAACTTTCCAGTGGCTTCTCTTCAGACTTCAATGTCACCGTCAGCTTCTTATTCTTCAACTTCTACAACTACTACTTTTGCTTCTTCTTTTAGTTCTCCACAGACAACTTCTTCAATCCCTTCGGGTTTGCCAGCATGGCCTTCTGGATATTGCTCCTCTCCCTCACGGTGA 954 0.392 MPLPMMFPGLNREGEMSAMVSALTHVICGDQNNDGGGDGYNVLNQNMNNNAFEGDGIDIKPFGSSSTSLSYGGNSALKRRREDGGFFDNSSSPITQIKHQGVECSSNWTNTVTTTTGRSQIEEQIYEYRTDNNNVKNEDQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLRFRGNKAKLNFPENVRLKQEQSFVNPTPTNLNISHSNSALLSHQPRTDPMVHNQVLHTLQSSNKYYDYFNGQNFPVASLQTSMSPSASYSSTSTTTTFASSFSSPQTTSSIPSGLPAWPSGYCSSPSR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04365 317 FunFam Ethylene-responsive transcription factor 2 143 202 - -
Mepo2g04365 317 SMART rav1_2 144 207 IPR001471 GO:0003700|GO:0006355
Mepo2g04365 317 CDD AP2 144 203 IPR001471 GO:0003700|GO:0006355
Mepo2g04365 317 SUPERFAMILY DNA-binding domain 144 202 IPR016177 GO:0003677
Mepo2g04365 317 ProSiteProfiles AP2/ERF domain profile. 144 201 IPR001471 GO:0003700|GO:0006355
Mepo2g04365 317 PANTHER DNA-BINDING DOMAIN 116 269 IPR044808 GO:0003700|GO:0009873
Mepo2g04365 317 PRINTS Ethylene responsive element binding protein signature 145 156 IPR001471 GO:0003700|GO:0006355
Mepo2g04365 317 PRINTS Ethylene responsive element binding protein signature 167 183 IPR001471 GO:0003700|GO:0006355
Mepo2g04365 317 Coils Coil 118 138 - -
Mepo2g04365 317 Gene3D AP2/ERF domain 143 203 IPR036955 GO:0003700|GO:0006355
Mepo2g04365 317 Pfam AP2 domain 144 193 IPR001471 GO:0003700|GO:0006355
Mepo2g04365 317 MobiDBLite consensus disorder prediction 274 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04365 Mepo-Chr2 52209061 52210580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04365 137 225 AP2-EREBP Transcription Factor Family AT5G13330 66.667 1.17e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo2g04365 AP2 4.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04365 - - mtr:11428940 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04365 2 52209061 52210580 Mepo2g04365 2 52209061 52210580 ECH
Mepo2g04365 2 52209061 52210580 Mepo3g06772 3 81519909 81521458 ECH