Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04344 ATGTCCCAAATTATTGACCACAACTTATTTGAGGAGGAGAATCAGATTCCCACACAAATGGGGTTCATTCCTTTCCCAACAAACCTTACTTTCCCTTTTTTGGATTGCAATCAATCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCACTTACATCTGAATCAGATTCTACATCAAATTTAACACAAACCCTGCTCACAACCAATCCTCAAAAATCAAAAGAATACCTCACTTCTAGCTTTGGAGGAAGTACTCCATTCCTATCATTGCATAGATCCATTGTACATCCATGGGCAATATTGGGAGGAGAAGTAATAAGTAATTGCATGAATAATAGTGGTAAAAGAAGTGGAGTAGATCATCATGATAATCATTTGGGGGTTTCTACTACCATGAAAATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACATTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTTGTAAAGAACACACAACATCCCAGAAGCTATTACCGTTGCACACAAGAGAATTGTCGCGTAAAGAAACGTGTGGAGCGCTTAGCTGAAGATCCAAGGATGGTAATAACGACATATGAAGGAAGACATGTACACTCTCCTTCCAATGATCTTGAAGACTCTCAAACTCAATCTGACAATTTCTTATGGTAG 705 0.3858 MSQIIDHNLFEEENQIPTQMGFIPFPTNLTFPFLDCNQSLKAFSSIASSLTSESDSTSNLTQTLLTTNPQKSKEYLTSSFGGSTPFLSLHRSIVHPWAILGGEVISNCMNNSGKRSGVDHHDNHLGVSTTMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSDNFLW 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04344 234 MobiDBLite consensus disorder prediction 211 234 - -
Mepo2g04344 234 FunFam WRKY transcription factor 57 144 219 - -
Mepo2g04344 234 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 53 220 IPR044810 GO:0003700
Mepo2g04344 234 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g04344 234 Gene3D WRKY domain 145 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo2g04344 234 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g04344 234 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo2g04344 234 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04344 Mepo-Chr2 52042647 52044517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04344 121 234 WRKY Transcription Factor Family AT4G39410 72.000 1.93e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo2g04344 WRKY 6.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04344 - - pvu:PHAVU_002G266400g 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04344 2 52042647 52044517 Mepo2g04344 2 52042647 52044517 ECH