Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g04309 ATGGATCCTTCATCATCTTCTCAATTTGTTTCCTCAAGAAATATTGGTGTATATGATCCTATACACCAATTTACTATATGGGAAGAACATTTCAAGAGTAATGGTGATTCAAGTGTATATGAACCTGAAATGAAGTTAAATAATCAGTCAGAGGATGCTTCTTTTGGAATATTGGGAACGTCTATCAAGTATGACCACCAAGAAGCTAACAAAGTTACTAATAAGATGCAAAGACGTCTTGCACAGAATCGAGAGGCTGCTCGTAAGAGTCGTTTGAAGAAAAAGGCTCATATACAACAGTTAGAATCGTGTCGTTTAAAGCTGTTACAGGTAGAGCAAGAGCTAGATCATACAAAACAGGGATTGTATATTGGCGGTAGATTGGATTCTAATAATTTAGGTTTTGCTGGCTCTGTAAATTCAGAAATAACAACTTTTAAGATGGAGTATGAACACTGGGTGGAAGAGCTAAACAGACAAATGTTGGAATTGAAAGGTGCTTTAAGTGCTCATATCAGTGATATACAAATTGGGGAACTTGTAAATGGCCTCATGAATCACTATTTCAAACTATTTTGCATGAAATCTGATGCTGCAAAAGTAGATGTTTTCTATGTTATCACTGGCATGTGGAAAACAACAGCTGAAGGGTTTTTCTTGTGGATTGGAGGTTTTCGCCCCTCCGAACTTCTAAAGGTCCTGGTCCCTTTAATTGAACCATTGACAGAGGAACAACGGTTTGATGCCTATAATCTTGAGAAGTCATGCCGACAAGCAGAAGATGCCCTTTCACAAGGTATGGAAAAACTACAGGGAATGCTTGTCGACACAGTTGCAGCAGGACAACTCATTGAAGGAACTTACATTCCACAGATGGATATTGCAATAGAGAGGCTGGAAGCTCTGGCTAGCTTTGTGAACCAGGCTGATCATCTTCGACAGGAAACGTTGCAACAGATGTCTCGAATACTTACCGTACGTCAAACTGCTCGATGGCTGCTTGCTTTGGGTGAATACTTTCAACGCCTAAGGGATTTGAGCAAACTTTGGATCAATCGTCCTCGTGAACCTGCATAG 1077 0.3993 MDPSSSSQFVSSRNIGVYDPIHQFTIWEEHFKSNGDSSVYEPEMKLNNQSEDASFGILGTSIKYDHQEANKVTNKMQRRLAQNREAARKSRLKKKAHIQQLESCRLKLLQVEQELDHTKQGLYIGGRLDSNNLGFAGSVNSEITTFKMEYEHWVEELNRQMLELKGALSAHISDIQIGELVNGLMNHYFKLFCMKSDAAKVDVFYVITGMWKTTAEGFFLWIGGFRPSELLKVLVPLIEPLTEEQRFDAYNLEKSCRQAEDALSQGMEKLQGMLVDTVAAGQLIEGTYIPQMDIAIERLEALASFVNQADHLRQETLQQMSRILTVRQTARWLLALGEYFQRLRDLSKLWINRPREPA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g04309 358 Pfam Seed dormancy control 160 235 IPR025422 GO:0006351|GO:0043565
Mepo2g04309 358 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Mepo2g04309 358 Pfam bZIP transcription factor 75 112 IPR004827 GO:0003700|GO:0006355
Mepo2g04309 358 PANTHER TRANSCRIPTION FACTOR TGA9 2 356 - -
Mepo2g04309 358 FunFam BZIP family transcription factor 74 122 - -
Mepo2g04309 358 SMART brlzneu 71 152 IPR004827 GO:0003700|GO:0006355
Mepo2g04309 358 SUPERFAMILY Leucine zipper domain 75 103 IPR046347 GO:0003700|GO:0006355
Mepo2g04309 358 ProSiteProfiles DOG1 domain profile. 143 353 IPR025422 GO:0006351|GO:0043565
Mepo2g04309 358 Gene3D - 74 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g04309 Mepo-Chr2 51705886 51709846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g04309 4 358 Calmodulin-binding Proteins AT5G65210 59.946 1.40e-155 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo2g04309 DOG1 1.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g04309 K14431 - gmx:100780003 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04309 2 51705886 51709846 Mepo2g04309 2 51705886 51709846 ECH
Mepo2g04309 2 51705886 51709846 Mepo3g06368 3 77740439 77743996 PCT